C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008WS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm694 VISTA 9606 12:102169845-102772373
GeneTranscriptPositionBiotype
ENSG00000017427 (IGF1)
insulin-like growth factor 1 (somatomedin C) 		ENST00000307046 (IGF1-002) 102417491-102480563 protein_coding
ENST00000337514 (IGF1-001) 102395874-102480645 protein_coding
ENST00000392904 (IGF1-005) 102402328-102480638 protein_coding
ENST00000392905 (IGF1-003) 102402517-102480324 protein_coding
ENST00000424202 (IGF1-004) 102402459-102478651 protein_coding
ENST00000456098 (IGF1-201) 102395867-102480600 protein_coding
ENST00000481539 (IGF1-006) 102402247-102415746 processed_transcript
ENSG00000183395 (PMCH)
pro-melanin-concentrating hormone 		ENST00000329406 (PMCH-001) 102196459-102197845 protein_coding
ENSG00000185480 (PARPBP)
PARP1 binding protein 		ENST00000327680 (PARPBP-001) 102120245-102197520 protein_coding
ENST00000392909 (PARPBP-012) 102120204-102151823 nonsense_mediated_decay
ENST00000392911 (PARPBP-006) 102120247-102196429 protein_coding
ENST00000392914 (PARPBP-013) 102123886-102152012 retained_intron
ENST00000412715 (PARPBP-010) 102123988-102197361 protein_coding
ENST00000417507 (PARPBP-009) 102123988-102197361 protein_coding
ENST00000457614 (PARPBP-003) 102123988-102197361 nonsense_mediated_decay
ENST00000535811 (PARPBP-011) 102123988-102197361 processed_transcript
ENST00000537257 (PARPBP-007) 102120245-102149007 protein_coding
ENST00000541394 (PARPBP-002) 102120185-102196667 protein_coding
ENST00000541668 (PARPBP-004) 102120383-102155280 processed_transcript
ENST00000543784 (PARPBP-008) 102120195-102196368 protein_coding
ENSG00000258142 (RP11-18O15.1)
 ENST00000547375 (RP11-18O15.1-001) 102230027-102230533 processed_pseudogene
ENSG00000264554 (RN7SL793P)
RNA, 7SL, cytoplasmic 793, pseudogene 		ENST00000583259 (RN7SL793P-201) 102217318-102217613 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008WS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm694 VISTA 10090 10:87568234-88170738
GeneTranscriptPositionBiotype
ENSMUSG00000020051 (Pah)
phenylalanine hydroxylase 		ENSMUST00000020241 (Pah-001) 87521795-87584136 protein_coding
ENSMUST00000133293 (Pah-002) 87546673-87570332 protein_coding
ENSMUST00000142088 (Pah-004) 87521930-87584034 protein_coding
ENSMUST00000143624 (Pah-003) 87522027-87583855 protein_coding
ENSMUSG00000020053 (Igf1)
insulin-like growth factor 1 		ENSMUST00000062862 (Igf1-002) 87860030-87915894 protein_coding
ENSMUST00000095360 (Igf1-001) 87859068-87937042 protein_coding
ENSMUST00000105300 (Igf1-003) 87859258-87931801 protein_coding
ENSMUST00000121161 (Igf1-006) 87860606-87930899 protein_coding
ENSMUST00000121952 (Igf1-007) 87859490-87930893 protein_coding
ENSMUST00000122100 (Igf1-004) 87861329-87930877 protein_coding
ENSMUST00000122386 (Igf1-005) 87858265-87930895 protein_coding
ENSMUST00000126490 (Igf1-008) 87859611-87915349 protein_coding
ENSMUSG00000035351 (Nup37)
nucleoporin 37 		ENSMUST00000052355 (Nup37-201) 88146992-88178388 protein_coding
ENSMUST00000169309 (Nup37-202) 88147071-88178388 protein_coding
ENSMUSG00000035365 (Parpbp)
PARP1 binding protein 		ENSMUST00000048518 (Parpbp-001) 88091432-88146941 protein_coding
ENSMUST00000164121 (Parpbp-004) 88126210-88146878 protein_coding
ENSMUST00000164803 (Parpbp-003) 88133151-88146878 protein_coding
ENSMUST00000168163 (Parpbp-002) 88126230-88146933 protein_coding
ENSMUSG00000035383 (Pmch)
pro-melanin-concentrating hormone 		ENSMUST00000048621 (Pmch-001) 88091072-88092375 protein_coding
ENSMUSG00000058934 (Igf1os)
insulin-like growth factor 1, opposite strand 		ENSMUST00000139652 (Igf1os-002) 87826377-87828362 antisense
ENSMUST00000146581 (Igf1os-001) 87826389-87863381 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008WS_0001ENSG00000017427ENST00000307046ENST00000337514ENST00000392904ENST00000392905ENST00000424202ENST00000456098ENST00000481539ENSG00000183395ENST00000329406ENSG00000185480ENST00000327680ENST00000392909ENST00000392911ENST00000392914ENST00000412715ENST00000417507ENST00000457614ENST00000535811ENST00000537257ENST00000541394ENST00000541668ENST00000543784ENSG00000258142ENST00000547375ENSG00000264554ENST00000583259CIL_0008WS_0002ENSMUSG00000020051ENSMUST00000020241ENSMUST00000133293ENSMUST00000142088ENSMUST00000143624ENSMUSG00000020053ENSMUST00000062862ENSMUST00000095360ENSMUST00000105300ENSMUST00000121161ENSMUST00000121952ENSMUST00000122100ENSMUST00000122386ENSMUST00000126490ENSMUSG00000035351ENSMUST00000052355ENSMUST00000169309ENSMUSG00000035365ENSMUST00000048518ENSMUST00000164121ENSMUST00000164803ENSMUST00000168163ENSMUSG00000035383ENSMUST00000048621ENSMUSG00000058934ENSMUST00000139652ENSMUST00000146581
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008WS_0001ENSG00000017427ENST00000307046ENST00000337514ENST00000424202ENST00000456098ENSG00000183395ENST00000329406ENSG00000185480ENST00000327680ENST00000392909ENST00000392911ENST00000412715ENST00000417507ENST00000457614ENST00000535811ENST00000537257ENST00000541394ENST00000541668ENST00000543784ENSG00000258142ENST00000547375ENSG00000264554ENST00000583259CIL_0008WS_0002ENSMUSG00000020051ENSMUST00000020241ENSMUST00000133293ENSMUST00000142088ENSMUST00000143624ENSMUSG00000020053ENSMUST00000062862ENSMUST00000095360ENSMUST00000105300ENSMUST00000121952ENSMUST00000122100ENSMUST00000122386ENSMUST00000126490ENSMUSG00000035351ENSMUST00000052355ENSMUST00000169309ENSMUSG00000035365ENSMUST00000048518ENSMUST00000164121ENSMUST00000164803ENSMUST00000168163ENSMUSG00000035383ENSMUST00000048621ENSMUSG00000058934ENSMUST00000139652ENSMUST00000146581
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000017427 ENST00000307046 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.780±0.00 N/A N/A 2.388±0.00 N/A
ENST00000337514 3.354±0.00 0.666±0.00 0.699±0.00 1.443±0.00 5.580±1.03 2.804±0.44 1.272±0.62 14.242±0.00 4.239±1.69 1.613±0.00 0.437±0.09 2.000±1.90 4.097±3.24 4.136±2.07
ENST00000392904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424202 N/A N/A 6.352±0.00 N/A N/A 11.855±0.00 N/A 56.750±0.00 27.366±0.00 N/A 6.587±0.00 10.748±0.00 N/A N/A
ENST00000456098 N/A 1.039±0.00 N/A N/A 1.657±0.00 N/A N/A N/A N/A N/A N/A 0.277±0.00 N/A 4.238±0.00
ENST00000481539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183395 ENST00000329406 0.178±0.00 0.966±0.00 N/A N/A 0.346±0.00 0.777±0.41 0.155±0.00 0.390±0.00 0.442±0.25 0.261±0.00 0.153±0.00 1.878±0.00 0.492±0.00 1.514±0.00
ENSG00000185480 ENST00000327680 N/A 0.141±0.00 N/A N/A 0.149±0.00 N/A N/A 0.017±0.00 N/A 0.166±0.00 N/A 0.641±0.13 0.465±0.29 0.708±0.00
ENST00000392909 N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A N/A N/A
ENST00000392911 N/A N/A N/A 0.034±0.00 0.143±0.00 0.555±0.00 0.075±0.02 N/A N/A N/A N/A 1.367±0.00 0.214±0.06 N/A
ENST00000392914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412715 N/A N/A N/A 0.185±0.00 N/A N/A N/A N/A 0.208±0.00 N/A N/A N/A N/A N/A
ENST00000417507 N/A N/A N/A N/A 0.314±0.00 N/A N/A 0.126±0.00 N/A N/A N/A 1.168±0.05 0.140±0.01 0.751±0.00
ENST00000457614 N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A 0.140±0.00 N/A N/A 0.172±0.00 N/A
ENST00000535811 N/A N/A N/A N/A N/A 0.428±0.22 N/A N/A 0.101±0.00 N/A N/A 1.562±0.00 0.125±0.00 N/A
ENST00000537257 N/A N/A N/A 0.182±0.00 N/A 0.099±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541394 N/A N/A N/A N/A 0.752±0.00 N/A N/A N/A N/A N/A N/A 0.759±0.00 N/A N/A
ENST00000541668 N/A 0.416±0.00 N/A N/A N/A N/A N/A N/A 0.063±0.00 0.196±0.00 N/A N/A N/A N/A
ENST00000543784 N/A N/A 0.570±0.00 N/A N/A 0.136±0.00 N/A N/A N/A N/A 0.102±0.00 N/A N/A N/A
ENSG00000258142 ENST00000547375 N/A 0.049±0.00 N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A N/A 0.200±0.10 N/A 0.066±0.00
ENSG00000264554 ENST00000583259 N/A N/A N/A 0.069±0.00 N/A N/A N/A N/A N/A N/A N/A 0.126±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020051 ENSMUST00000020241 0.063±0.00 0.120±0.08 N/A 0.006±0.00 0.569±0.46 0.161±0.07 0.071±0.04 328.204±52.03 163.433±136.14 0.072±0.04 0.119±0.00 0.212±0.12 0.018±0.00 0.017±0.00
ENSMUST00000133293 0.203±0.00 0.360±0.17 N/A N/A 0.128±0.11 N/A 0.122±0.09 N/A N/A 0.082±0.00 N/A 0.686±0.00 0.074±0.01 N/A
ENSMUST00000142088 N/A N/A N/A 0.006±0.00 N/A N/A 0.052±0.00 N/A N/A 0.092±0.01 0.060±0.00 N/A N/A 0.112±0.04
ENSMUST00000143624 N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A 0.482±0.00 0.040±0.00 0.102±0.00
ENSMUSG00000020053 ENSMUST00000062862 N/A 1.123±0.30 N/A N/A 4.749±0.00 0.284±0.00 N/A N/A N/A N/A N/A 3.042±0.29 N/A N/A
ENSMUST00000095360 15.901±3.19 1.069±0.29 7.756±0.71 0.875±0.27 7.627±1.19 0.524±0.14 1.294±0.32 2.125±0.38 19.555±17.93 1.381±0.17 1.764±0.47 4.870±2.15 1.001±1.43 0.302±0.15
ENSMUST00000105300 36.636±11.04 6.017±2.12 N/A N/A 22.596±6.64 2.556±1.23 1.616±0.25 2.773±0.73 36.178±35.06 3.810±1.31 N/A 18.470±4.18 N/A 1.005±0.23
ENSMUST00000121161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000121952 N/A N/A N/A N/A N/A 1.429±0.17 N/A 3.233±0.00 61.667±51.16 1.935±0.00 N/A 11.607±6.50 N/A 1.830±0.39
ENSMUST00000122100 N/A 3.311±0.00 N/A N/A N/A 1.970±0.56 N/A 3.802±0.00 47.604±55.07 3.435±0.79 N/A 40.817±0.00 1.271±0.00 2.977±0.00
ENSMUST00000122386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.731±0.00
ENSMUST00000126490 89.174±9.07 6.208±2.00 N/A N/A 45.462±8.14 3.040±0.46 N/A 6.710±0.64 333.897±141.81 5.349±0.95 N/A 38.827±9.57 N/A 2.412±0.00
ENSMUSG00000035351 ENSMUST00000052355 3.685±0.97 1.301±0.27 6.613±1.12 8.484±2.26 2.737±1.63 1.185±0.55 2.164±0.19 3.059±0.55 9.231±8.52 1.668±0.54 2.031±0.37 3.798±1.36 9.789±5.75 6.544±3.29
ENSMUST00000169309 0.621±0.00 1.633±0.00 N/A 0.407±0.00 0.581±0.21 1.418±0.42 0.531±0.17 1.279±0.65 1.570±0.57 0.629±0.44 0.685±0.42 1.512±0.44 2.149±0.52 N/A
ENSMUSG00000035365 ENSMUST00000048518 0.295±0.19 0.286±0.14 0.098±0.06 0.904±0.05 0.141±0.09 0.586±0.40 0.031±0.02 0.023±0.01 2.513±2.59 0.147±0.05 0.022±0.02 0.674±0.32 1.453±1.32 3.415±0.71
ENSMUST00000164121 N/A N/A N/A N/A N/A 0.700±0.00 N/A 0.197±0.06 N/A 0.298±0.13 N/A N/A N/A N/A
ENSMUST00000164803 N/A N/A N/A N/A 0.170±0.00 0.453±0.00 0.150±0.00 0.082±0.00 N/A N/A N/A N/A 4.706±0.00 N/A
ENSMUST00000168163 N/A N/A N/A N/A 0.130±0.00 N/A N/A N/A N/A N/A N/A 1.004±0.00 N/A N/A
ENSMUSG00000035383 ENSMUST00000048621 N/A N/A N/A 7.431±8.72 N/A N/A 0.066±0.00 N/A N/A N/A 0.048±0.00 N/A 0.113±0.00 N/A
ENSMUSG00000058934 ENSMUST00000139652 N/A N/A N/A N/A 0.209±0.03 N/A 0.094±0.00 N/A 0.168±0.15 N/A 0.166±0.12 0.259±0.15 N/A 0.074±0.01
ENSMUST00000146581 0.246±0.13 N/A 0.021±0.01 0.008±0.00 0.102±0.06 N/A 0.042±0.01 0.016±0.00 0.062±0.07 0.031±0.00 0.037±0.01 0.122±0.09 0.028±0.00 0.022±0.01

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