C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: erythrocyte protein band 4.1-like 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052404 Epb4.1l5-003 ENSMUSG00000026383 10090 - 1:119545037-119648936 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052404
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052404 1.378±0.58 1.097±0.58 1.111±0.18 3.412±1.05 0.667±0.28 0.726±0.13 0.406±0.12 4.688±0.63 1.136±0.38 5.296±0.18 0.119±0.04 4.088±1.59 1.032±0.44 2.085±1.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WE CIL_0003WE_0002 CGP 1:119545037-119837613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000904 IMP cell morphogenesis involved in differentiation
GO:0001701 IMP in utero embryonic development
GO:0001756 IMP somitogenesis
GO:0001837 IMP epithelial to mesenchymal transition
GO:0001839 IMP neural plate morphogenesis
GO:0001954 IMP positive regulation of cell-matrix adhesion
GO:0003382 IMP epithelial cell morphogenesis
GO:0003383 IDA apical constriction
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006931 IMP substrate-dependent cell migration, cell attachment to substrate
GO:0007398 IMP ectoderm development
GO:0007492 IMP endoderm development
GO:0007498 IMP mesoderm development
GO:0007509 IMP mesoderm migration involved in gastrulation
GO:0008092 IEA cytoskeletal protein binding
GO:0009826 IDA unidimensional cell growth
GO:0010608 IMP posttranscriptional regulation of gene expression
GO:0010634 IMP positive regulation of epithelial cell migration
GO:0010718 IMP positive regulation of epithelial to mesenchymal transition
GO:0019898 IEA extrinsic component of membrane
GO:0019904 IPI protein domain specific binding
GO:0022408 IMP negative regulation of cell-cell adhesion
GO:0030036 IDA actin cytoskeleton organization
GO:0031032 IDA actomyosin structure organization
GO:0031252 IDA cell leading edge
GO:0032091 IDA negative regulation of protein binding
GO:0032092 IDA positive regulation of protein binding
GO:0032525 IMP somite rostral/caudal axis specification
GO:0032587 IDA ruffle membrane
GO:0048318 IMP axial mesoderm development
GO:0048319 IMP axial mesoderm morphogenesis
GO:0048339 IMP paraxial mesoderm development
GO:0048617 IMP embryonic foregut morphogenesis
GO:0051894 IMP positive regulation of focal adhesion assembly
GO:0070201 IDA regulation of establishment of protein localization
GO:0070986 IMP left/right axis specification
GO:0071560 IDA cellular response to transforming growth factor beta stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263713 EPB41L5-001 protein_coding Homo_sapiens 0 2202
ENST00000331393 EPB41L5-006 protein_coding Homo_sapiens 0 1609
ENST00000443124 EPB41L5-004 protein_coding Homo_sapiens 0 1609
ENST00000443902 EPB41L5-002 protein_coding Homo_sapiens 0 2071
ENST00000452780 EPB41L5-007 protein_coding Homo_sapiens 0 2182
ENST00000466241 EPB41L5-008 retained_intron Homo_sapiens 0 464

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