C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 28A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052648 Ccdc28a-002 ENSMUSG00000059554 10090 - 10:18216784-18234978 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052648
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052648 0.925±0.18 0.896±0.24 1.004±0.11 0.704±0.00 0.510±0.06 1.061±0.17 0.513±0.06 1.101±0.10 0.867±0.22 0.467±0.11 0.378±0.20 0.739±0.24 1.716±0.92 12.189±5.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000528 CIL_000528_0002 CGP 10:18129022-18234998

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332797 CCDC28A-001 protein_coding Homo_sapiens 0 562
ENST00000610978 CCDC28A-201 protein_coding Homo_sapiens 0 549
ENST00000611852 CCDC28A-202 protein_coding Homo_sapiens 0 562
ENST00000617445 CCDC28A-002 protein_coding Homo_sapiens 0 562

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