C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052932 Pde12-001 ENSMUSG00000043702 10090 - 14:26659958-26669883 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000052932
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000052932 3.112±1.61 2.961±0.86 13.574±2.06 1.417±0.23 3.760±1.41 4.248±0.44 4.302±0.12 0.785±0.07 14.198±0.43 2.641±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074S CIL_00074S_0002 CGP 14:26638074-26669883

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004535 IEA poly(A)-specific ribonuclease activity
GO:0005739 IDA mitochondrion
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding
GO:0090503 IEA RNA phosphodiester bond hydrolysis, exonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311180 PDE12-001 protein_coding Homo_sapiens 0 2063
ENST00000487257 PDE12-002 protein_coding Homo_sapiens 0 1413

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