C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal-induced proliferation-associated 1 like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053969 Sipa1l1-201 ENSMUSG00000042700 10090 + 12:82311349-82451782 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053969
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053969 3.088±0.00 2.452±0.47 4.203±1.33 4.791±1.73 1.305±0.00 2.896±0.65 0.456±0.00 5.408±1.56 1.158±0.67 3.009±0.00 1.230±0.41 5.158±1.79 4.734±2.67 3.095±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M7 CIL_0002M7_0002 CGP 12:81860030-82451782

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005737 IEA cytoplasm
GO:0014069 ISS postsynaptic density
GO:0030054 IEA cell junction
GO:0031532 ISS actin cytoskeleton reorganization
GO:0032317 IMP regulation of Rap GTPase activity
GO:0032861 ISS activation of Rap GTPase activity
GO:0043197 ISS dendritic spine
GO:0045211 IEA postsynaptic membrane
GO:0046875 IPI ephrin receptor binding
GO:0048013 IMP ephrin receptor signaling pathway
GO:0048167 ISS regulation of synaptic plasticity
GO:0050770 IDA regulation of axonogenesis
GO:0061001 ISS regulation of dendritic spine morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000011018 sipa1l1-201 protein_coding Danio_rerio 0 544
ENSDART00000114611 sipa1l1-001 protein_coding Danio_rerio 0 544
ENSDART00000147385 SIPA1L3-001 protein_coding Danio_rerio 0 313
ENST00000262861 SIPA1L2-201 protein_coding Homo_sapiens 0.00000000003 77
ENST00000308942 SIPA1L2-002 protein_coding Homo_sapiens 0.00000000001 77
ENST00000358550 SIPA1L1-001 protein_coding Homo_sapiens 0 6763
ENST00000366630 SIPA1L2-001 protein_coding Homo_sapiens 0.00000000003 77
ENST00000381232 SIPA1L1-003 protein_coding Homo_sapiens 0 6752
ENST00000537413 SIPA1L1-019 protein_coding Homo_sapiens 0 4698
ENST00000554874 SIPA1L1-005 processed_transcript Homo_sapiens 0 2241
ENST00000554960 SIPA1L1-004 retained_intron Homo_sapiens 0 335
ENST00000555066 SIPA1L1-006 protein_coding Homo_sapiens 0 484
ENST00000555818 SIPA1L1-002 protein_coding Homo_sapiens 0 4612
ENST00000556959 SIPA1L1-007 retained_intron Homo_sapiens 0 475

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