C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002M7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100731-ENSG00000197555 CGP 9606 14:70907405-71741229
GeneTranscriptPositionBiotype
ENSG00000100731 (PCNX)
pecanex homolog (Drosophila) 		ENST00000304743 (PCNX-001) 70907405-71115382 protein_coding
ENST00000439984 (PCNX-004) 70907739-71110118 protein_coding
ENST00000553272 (PCNX-010) 70965365-70977290 processed_transcript
ENST00000553428 (PCNX-011) 70965370-70977151 processed_transcript
ENST00000553508 (PCNX-007) 70946882-70969271 retained_intron
ENST00000554292 (PCNX-006) 70907670-70942940 processed_transcript
ENST00000554691 (PCNX-003) 71013031-71110153 protein_coding
ENST00000554707 (PCNX-013) 71026195-71027202 retained_intron
ENST00000554879 (PCNX-002) 70907405-71012838 retained_intron
ENST00000555780 (PCNX-008) 71109020-71110161 protein_coding
ENST00000556272 (PCNX-005) 71092554-71110148 processed_transcript
ENST00000556516 (PCNX-015) 71050658-71060742 processed_transcript
ENST00000556846 (PCNX-012) 70978378-71009868 retained_intron
ENST00000556849 (PCNX-014) 71047960-71073759 protein_coding
ENST00000557428 (PCNX-009) 71078651-71102189 processed_transcript
ENSG00000197555 (SIPA1L1)
signal-induced proliferation-associated 1 like 1 		ENST00000358550 (SIPA1L1-001) 71586281-71739401 protein_coding
ENST00000381232 (SIPA1L1-003) 71529325-71739405 protein_coding
ENST00000537413 (SIPA1L1-019) 71598234-71739341 protein_coding
ENST00000553453 (SIPA1L1-015) 71320449-71529370 processed_transcript
ENST00000554126 (SIPA1L1-009) 71320476-71573513 processed_transcript
ENST00000554362 (SIPA1L1-014) 71320476-71587694 processed_transcript
ENST00000554874 (SIPA1L1-005) 71702312-71739367 processed_transcript
ENST00000554960 (SIPA1L1-004) 71685362-71709342 retained_intron
ENST00000555066 (SIPA1L1-006) 71618756-71661449 protein_coding
ENST00000555652 (SIPA1L1-016) 71320515-71587622 processed_transcript
ENST00000555818 (SIPA1L1-002) 71529325-71741229 protein_coding
ENST00000555989 (SIPA1L1-008) 71320449-71587765 processed_transcript
ENST00000556408 (SIPA1L1-013) 71320473-71573800 processed_transcript
ENST00000556780 (SIPA1L1-012) 71320476-71573653 processed_transcript
ENST00000556959 (SIPA1L1-007) 71730192-71735593 retained_intron
ENST00000557151 (SIPA1L1-010) 71321391-71587969 protein_coding
ENST00000557469 (SIPA1L1-011) 71413954-71416283 processed_transcript
ENST00000557712 (SIPA1L1-017) 71467185-71575086 processed_transcript
ENSG00000242330 (RN7SL683P)
RNA, 7SL, cytoplasmic 683, pseudogene 		ENST00000460552 (RN7SL683P-201) 71448689-71448958 misc_RNA
ENSG00000258517 (RP6-91H8.1)
 ENST00000553621 (RP6-91H8.1-001) 71212633-71218216 lincRNA
ENSG00000258571 (PTTG4P)
pituitary tumor-transforming 4 pseudogene 		ENST00000556391 (PTTG4P-001) 71085482-71085833 processed_pseudogene
ENSG00000258930 (RP5-1163L11.2)
 ENST00000555418 (RP5-1163L11.2-001) 71031686-71031970 transcribed_processed_pseudogene
ENSG00000258966 (GTF3AP2)
general transcription factor IIIA pseudogene 2 		ENST00000557014 (GTF3AP2-001) 71044375-71044640 transcribed_processed_pseudogene
ENSG00000259079 (RP1-261D10.1)
 ENST00000554427 (RP1-261D10.1-001) 71330342-71330738 processed_pseudogene
ENSG00000259146 (RP1-261D10.2)
 ENST00000554634 (RP1-261D10.2-002) 71307170-71311359 antisense
ENST00000555771 (RP1-261D10.2-001) 71292729-71321814 antisense
ENSG00000259907 (RP6-91H8.2)
 ENST00000561794 (RP6-91H8.2-001) 71181456-71182106 lincRNA
ENSG00000269927 (RP6-91H8.3)
 ENST00000602957 (RP6-91H8.3-001) 71141125-71143253 lincRNA
ENSG00000269945 (RP6-91H8.5)
 ENST00000602396 (RP6-91H8.5-001) 71219100-71222724 lincRNA
CIL_0002M7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021140-ENSMUSG00000042700 CGP 10090 12:81860030-82451782
GeneTranscriptPositionBiotype
ENSMUSG00000021140 (Pcnx)
pecanex homolog (Drosophila) 		ENSMUST00000021567 (Pcnx-201) 81860030-82000924 protein_coding
ENSMUSG00000042700 (Sipa1l1)
signal-induced proliferation-associated 1 like 1 		ENSMUST00000053969 (Sipa1l1-201) 82311349-82451782 protein_coding
ENSMUST00000166429 (Sipa1l1-202) 82170016-82451782 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002M7_0001ENSG00000100731ENST00000304743ENST00000439984ENST00000553272ENST00000553428ENST00000553508ENST00000554292ENST00000554691ENST00000554707ENST00000554879ENST00000555780ENST00000556272ENST00000556516ENST00000556846ENST00000556849ENST00000557428ENSG00000197555ENST00000358550ENST00000381232ENST00000537413ENST00000553453ENST00000554126ENST00000554362ENST00000554874ENST00000554960ENST00000555066ENST00000555652ENST00000555818ENST00000555989ENST00000556408ENST00000556780ENST00000556959ENST00000557151ENST00000557469ENST00000557712ENSG00000242330ENST00000460552ENSG00000258517ENST00000553621ENSG00000258571ENST00000556391ENSG00000258930ENST00000555418ENSG00000258966ENST00000557014ENSG00000259079ENST00000554427ENSG00000259146ENST00000554634ENST00000555771ENSG00000259907ENST00000561794ENSG00000269927ENST00000602957ENSG00000269945ENST00000602396CIL_0002M7_0002ENSMUSG00000021140ENSMUST00000021567ENSMUSG00000042700ENSMUST00000053969ENSMUST00000166429
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002M7_0001ENSG00000100731ENST00000304743ENST00000439984ENST00000554691ENST00000554879ENSG00000197555ENST00000358550ENST00000381232ENST00000537413ENST00000554874ENST00000555652ENST00000555818ENSG00000242330ENST00000460552ENSG00000258517ENST00000553621ENSG00000258571ENST00000556391ENSG00000258930ENST00000555418ENSG00000258966ENST00000557014ENSG00000259079ENST00000554427ENSG00000259146ENST00000554634ENST00000555771ENSG00000259907ENST00000561794ENSG00000269927ENST00000602957ENSG00000269945ENST00000602396CIL_0002M7_0002ENSMUSG00000021140ENSMUST00000021567ENSMUSG00000042700ENSMUST00000053969ENSMUST00000166429
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100731 ENST00000304743 1.968±0.00 N/A 2.142±0.00 3.039±1.20 2.182±0.42 2.753±0.88 3.260±1.37 0.535±0.00 0.440±0.00 2.648±1.95 1.912±0.59 2.482±1.99 0.863±0.46 2.787±1.38
ENST00000439984 4.028±0.00 3.085±0.00 2.105±0.00 1.762±0.15 3.005±0.85 1.529±0.05 2.864±0.43 N/A 2.308±1.37 4.235±1.05 5.720±0.00 1.749±1.02 0.975±0.10 5.958±2.60
ENST00000553272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554691 N/A N/A N/A N/A N/A N/A N/A 2.184±0.00 N/A N/A N/A 0.847±0.00 0.795±0.00 3.388±0.00
ENST00000554707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554879 N/A N/A 1.648±0.00 N/A 1.779±0.00 N/A N/A N/A 3.329±0.00 N/A N/A N/A N/A N/A
ENST00000555780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197555 ENST00000358550 N/A N/A N/A 3.157±0.00 N/A N/A 0.105±0.00 N/A N/A N/A N/A 0.760±0.00 N/A N/A
ENST00000381232 1.576±0.00 2.515±0.00 2.143±0.00 1.861±0.00 1.785±0.00 2.137±0.10 0.286±0.00 2.747±0.60 1.428±0.68 2.369±0.17 0.090±0.00 1.877±0.60 1.348±0.19 7.767±1.35
ENST00000537413 1.104±0.00 N/A 0.928±0.00 N/A 1.224±0.00 1.024±0.00 0.243±0.00 0.648±0.00 1.189±0.00 1.811±0.00 0.604±0.12 2.468±0.44 1.146±0.57 6.544±0.38
ENST00000553453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554874 1.784±0.00 5.563±0.00 N/A N/A N/A 2.548±0.00 0.631±0.00 5.263±0.00 6.156±0.00 6.674±0.00 N/A 4.968±0.33 2.156±1.01 N/A
ENST00000554960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.855±0.00 N/A N/A N/A
ENST00000555818 N/A 1.036±0.00 0.585±0.00 7.880±3.39 0.860±0.00 N/A 0.300±0.00 N/A 0.958±0.00 1.042±0.00 0.562±0.00 1.267±0.80 0.505±0.00 3.137±0.00
ENST00000555989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242330 ENST00000460552 N/A N/A 0.464±0.00 0.136±0.00 0.063±0.00 3.339±0.00 N/A N/A N/A N/A N/A 0.211±0.00 N/A 0.218±0.01
ENSG00000258517 ENST00000553621 N/A 0.087±0.00 N/A 0.119±0.00 0.271±0.14 0.101±0.00 N/A N/A 0.019±0.00 N/A N/A 0.063±0.00 N/A 0.063±0.00
ENSG00000258571 ENST00000556391 N/A 0.162±0.00 2.591±0.00 0.137±0.00 N/A 0.626±0.39 0.441±0.00 N/A N/A 1.663±0.00 1.701±0.00 0.098±0.01 N/A 0.104±0.07
ENSG00000258930 ENST00000555418 N/A 0.071±0.00 N/A N/A N/A N/A 1.463±0.00 N/A 2.861±0.00 N/A 0.061±0.00 N/A N/A N/A
ENSG00000258966 ENST00000557014 N/A 0.063±0.00 N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.04
ENSG00000259079 ENST00000554427 N/A 0.427±0.00 6.673±0.00 0.660±0.00 1.592±0.00 3.647±0.00 0.466±0.00 0.235±0.19 0.576±0.54 4.567±0.00 3.827±0.00 0.612±0.43 0.178±0.00 N/A
ENSG00000259146 ENST00000554634 0.107±0.00 0.258±0.00 N/A 0.549±0.00 0.260±0.00 0.243±0.00 0.128±0.00 0.074±0.00 0.125±0.00 0.256±0.00 0.122±0.00 0.302±0.14 N/A 1.560±0.72
ENST00000555771 0.205±0.00 0.370±0.00 0.866±0.00 0.826±0.00 0.216±0.00 0.180±0.15 0.054±0.00 1.064±0.00 0.481±0.00 0.114±0.00 0.315±0.00 0.256±0.18 0.249±0.00 0.608±0.00
ENSG00000259907 ENST00000561794 N/A 0.337±0.00 N/A 0.026±0.00 0.170±0.00 N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A 32.212±0.64
ENSG00000269927 ENST00000602957 0.018±0.00 0.229±0.00 0.056±0.00 0.075±0.00 0.073±0.02 0.073±0.04 0.067±0.00 0.048±0.00 0.031±0.00 N/A 0.032±0.00 0.053±0.04 0.114±0.05 0.047±0.04
ENSG00000269945 ENST00000602396 0.136±0.00 0.527±0.00 0.038±0.00 0.218±0.11 0.302±0.00 0.119±0.00 0.175±0.00 0.226±0.00 0.133±0.07 0.067±0.06 0.089±0.00 0.054±0.02 0.013±0.00 0.137±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021140 ENSMUST00000021567 3.092±0.00 9.321±6.45 1.010±0.00 1.274±0.00 7.500±3.89 4.182±1.78 4.383±2.01 3.278±2.04 1.271±1.31 13.944±0.00 1.113±0.07 6.445±3.95 1.396±1.19 5.722±2.85
ENSMUSG00000042700 ENSMUST00000053969 3.088±0.00 2.452±0.47 4.203±1.33 4.791±1.73 1.305±0.00 2.896±0.65 0.456±0.00 5.408±1.56 1.158±0.67 3.009±0.00 1.230±0.41 5.158±1.79 4.734±2.67 3.095±0.00
ENSMUST00000166429 2.717±1.14 2.504±0.46 0.882±0.00 0.820±0.14 2.116±0.91 2.962±0.49 0.771±0.20 2.381±0.00 2.099±0.04 4.661±1.69 N/A 4.964±1.59 N/A N/A

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