C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 201
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054459 Tmem201-006 ENSMUSG00000044700 10090 - 4:149715383-149738044 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000054459
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000054459 2.150±0.84 3.678±0.36 1.149±0.02 3.761±1.40 3.284±0.17 2.378±0.24 1.504±0.23 1.410±0.51 2.272±0.31 5.912±1.20 1.091±0.40 0.866±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VW CIL_0008VW_0002 VISTA 4:149592945-150194331
CIL_0003MP CIL_0003MP_0002 CGP 4:149715375-149774277

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005521 IDA lamin binding
GO:0007097 IMP nuclear migration
GO:0010761 IMP fibroblast migration
GO:0016021 IEA integral component of membrane
GO:0031965 IDA nuclear membrane
GO:0051015 IDA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340305 TMEM201-003 protein_coding Homo_sapiens 0 1197
ENST00000340381 TMEM201-002 protein_coding Homo_sapiens 0 1746
ENST00000416541 TMEM201-001 protein_coding Homo_sapiens 0 1020
ENST00000508400 TMEM201-005 nonsense_mediated_decay Homo_sapiens 0 357

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