C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 201
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340381 TMEM201-002 ENSG00000188807 9606 + 1:9588922-9614849 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340381
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340381 1.517±0.00 0.803±0.00 0.208±0.00 0.126±0.00 0.693±0.48 0.858±0.00 0.897±0.00 0.228±0.00 1.114±0.00 1.981±0.00 2.744±0.00 0.861±0.31 4.565±1.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VW CIL_0008VW_0001 VISTA 1:9071068-9672775

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005521 IEA lamin binding
GO:0007097 IEA nuclear migration
GO:0010761 IEA fibroblast migration
GO:0016021 IEA integral component of membrane
GO:0031965 IEA nuclear membrane
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105687 Tmem201-001 protein_coding Mus_musculus 0 1842
ENSMUST00000054459 Tmem201-006 protein_coding Mus_musculus 0 1746
ENSMUST00000103208 Tmem201-002 protein_coding Mus_musculus 0 1197
ENSMUST00000140889 Tmem201-004 retained_intron Mus_musculus 0 739
ENSMUST00000139923 Tmem201-003 retained_intron Mus_musculus 0 654

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