C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054462 Tbc1d8-201 ENSMUSG00000003134 10090 - 1:39371499-39478747 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054462
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054462 7.286±2.51 2.596±1.12 21.887±1.86 4.196±1.91 7.686±2.03 6.726±0.84 3.134±0.29 2.963±0.43 6.542±4.32 14.278±1.31 4.354±0.60 10.835±3.42 5.898±2.53 3.848±1.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TG CIL_0008TG_0002 VISTA 1:39141367-39744845
CIL_0004HI CIL_0004HI_0002 CGP 1:39193731-39371908
CIL_0004HF CIL_0004HF_0002 CGP 1:39367851-39478747
CIL_0004HG CIL_0004HG_0002 CGP 1:39371499-39546881

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005097 IEA Rab GTPase activator activity
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376840 TBC1D8-011 protein_coding Homo_sapiens 0 3781
ENST00000409318 TBC1D8-001 protein_coding Homo_sapiens 0 3441
ENST00000473937 TBC1D8-007 retained_intron Homo_sapiens 0 643
ENST00000485875 TBC1D8-009 retained_intron Homo_sapiens 0 431

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