C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054665 Ankrd23-201 ENSMUSG00000067653 10090 - 1:36530534-36535729 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054665
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054665 3.585±2.60 9.665±1.13 6.268±1.12 89.053±101.20 6.095±1.45 103.210±58.92 9.438±7.12 1.663±0.81 10.727±4.28 743.080±343.36 14.012±5.19 2.571±0.38 3.115±1.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UB CIL_0002UB_0002 CGP 1:36511867-36535729
CIL_0002UC CIL_0002UC_0002 CGP 1:36530534-36547201

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0006631 IDA fatty acid metabolic process
GO:0031674 IDA I band

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318357 ANKRD23-001 protein_coding Homo_sapiens 0 1013
ENST00000331001 ANKRD23-003 protein_coding Homo_sapiens 0 348
ENST00000418232 ANKRD23-002 protein_coding Homo_sapiens 0 1013
ENST00000443120 ANKRD39-002 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000462692 ANKRD23-007 processed_transcript Homo_sapiens 0 699
ENST00000476975 ANKRD23-008 processed_transcript Homo_sapiens 2e-35 154
ENST00000482175 ANKRD23-004 retained_intron Homo_sapiens 4.00001e-40 171

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