C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443120 ANKRD39-002 ENSG00000213337 9606 - 2:96836611-96858014 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonLungOvaryTestisENST00000443120
Transcript ID Adrenal Bladder Brain Breast Colon Lung Ovary Testis
ENST00000443120 0.868±0.00 0.228±0.00 0.949±0.00 0.453±0.00 0.250±0.00 0.331±0.00 1.657±0.54 1.121±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UB CIL_0002UB_0001 CGP 2:96816245-96857934
CIL_0002UC CIL_0002UC_0001 CGP 2:96824526-96858095
CIL_0002UD CIL_0002UD_0001 CGP 2:96836611-96870757

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001172 Ankrd39-201 protein_coding Mus_musculus 0 654
ENSMUST00000054665 Ankrd23-201 protein_coding Mus_musculus 0 442

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