C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 444
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054680 Zfp444-002 ENSMUSG00000044876 10090 + 7:6172502-6191349 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054680
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054680 2.394±1.29 4.613±0.72 1.770±0.20 4.009±2.64 2.870±1.18 6.737±0.58 0.905±0.28 4.471±0.45 1.973±0.64 4.758±0.70 0.422±0.14 7.594±2.26 1.082±0.54 2.170±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045Z CIL_00045Z_0002 CGP 7:6131489-6191349
CIL_00046H CIL_00046H_0002 CGP 7:6172226-6216137

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003676 IEA nucleic acid binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337080 ZNF444-001 protein_coding Homo_sapiens 0 774
ENST00000587236 ZNF444-002 retained_intron Homo_sapiens 0 468
ENST00000587664 ZNF444-005 processed_transcript Homo_sapiens 0 375
ENST00000592949 ZNF444-013 protein_coding Homo_sapiens 0 789

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