C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: echinoderm microtubule associated protein like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054955 Eml1-001 ENSMUSG00000058070 10090 + 12:108410542-108539575 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054955
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054955 12.718±0.21 29.890±9.77 6.045±3.33 5.998±0.00 6.783±0.56 8.688±1.88 1.095±0.00 0.208±0.12 8.178±2.07 5.946±0.00 13.000±0.63 2.458±0.51 0.508±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CK CIL_0009CK_0002 VISTA 12:107949271-108552884
CIL_0003HG CIL_0003HG_0002 CGP 12:108334377-108539617
CIL_0003HN CIL_0003HN_0002 CGP 12:108370957-108688513

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0005829 IDA cytosol
GO:0005874 IEA microtubule
GO:0007052 IMP mitotic spindle organization
GO:0007405 IMP neuroblast proliferation
GO:0007420 IMP brain development
GO:0008017 IDA microtubule binding
GO:0015631 ISS tubulin binding
GO:0097431 IMP mitotic spindle pole
GO:1990023 IMP mitotic spindle midzone

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262233 EML1-001 protein_coding Homo_sapiens 0 2704
ENST00000327921 EML1-003 protein_coding Homo_sapiens 0 2348
ENST00000334192 EML1-002 protein_coding Homo_sapiens 0 2405
ENST00000553313 EML1-020 retained_intron Homo_sapiens 0 540
ENST00000556199 EML1-007 protein_coding Homo_sapiens 0.0000008 58

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