C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane anterior posterior transformation 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055128 Tapt1-201 ENSMUSG00000046985 10090 - 5:44175164-44226606 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055128
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055128 10.870±2.50 12.986±4.04 13.129±1.91 5.933±2.28 22.061±6.54 9.369±3.09 6.636±0.24 9.939±1.17 17.684±2.37 13.829±2.60 14.629±1.39 11.579±4.46 8.288±3.15 8.345±3.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033W CIL_00033W_0004 CGP 5:44175164-44799707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0009791 IMP post-embryonic development
GO:0016021 IEA integral component of membrane
GO:0048706 IMP embryonic skeletal system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000086867 tapt1b-001 protein_coding Danio_rerio 0 785
ENST00000405303 TAPT1-001 protein_coding Homo_sapiens 0 2490
ENST00000503858 TAPT1-017 retained_intron Homo_sapiens 0 427
ENST00000505152 TAPT1-015 processed_transcript Homo_sapiens 0 750
ENST00000505317 TAPT1-004 retained_intron Homo_sapiens 0 244
ENST00000505603 TAPT1-002 nonsense_mediated_decay Homo_sapiens 0 1831
ENST00000507425 TAPT1-007 retained_intron Homo_sapiens 0 675
ENST00000507728 TAPT1-008 retained_intron Homo_sapiens 0 195
ENST00000508886 TAPT1-010 retained_intron Homo_sapiens 0 335
ENST00000508888 TAPT1-014 processed_transcript Homo_sapiens 0 904
ENST00000510868 TAPT1-013 processed_transcript Homo_sapiens 0 758
ENST00000511156 TAPT1-012 processed_transcript Homo_sapiens 0 222
ENST00000511866 TAPT1-011 processed_transcript Homo_sapiens 0 237
ENST00000513359 TAPT1-006 processed_transcript Homo_sapiens 0 904
ENST00000513782 TAPT1-005 nonsense_mediated_decay Homo_sapiens 0 560
ENST00000513833 TAPT1-018 nonsense_mediated_decay Homo_sapiens 0 340

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