C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-acetylglutamate synthase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055409 Nags-001 ENSMUSG00000048217 10090 + 11:102145549-102149477 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartLiverLungOvaryPlacentaENSMUST00000055409
Transcript ID Adrenal Colon Heart Liver Lung Ovary Placenta
ENSMUST00000055409 0.073±0.00 0.627±0.23 0.050±0.00 4.061±2.47 0.093±0.00 0.198±0.00 0.165±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000997 CIL_000997_0002 VISTA 11:101567301-102168287
CIL_0009B6 CIL_0009B6_0002 VISTA 11:102063033-102664797
CIL_0005EM CIL_0005EM_0002 CGP 11:102106676-102149477
CIL_00059K CIL_00059K_0002 CGP 11:102145513-102156404

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000050 IEA urea cycle
GO:0004042 IDA acetyl-CoA:L-glutamate N-acetyltransferase activity
GO:0005739 TAS mitochondrion
GO:0006526 IEA arginine biosynthetic process
GO:0006536 IDA glutamate metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293404 NAGS-001 protein_coding Homo_sapiens 0 1487
ENST00000589767 NAGS-005 protein_coding Homo_sapiens 0 1347
ENST00000592915 NAGS-002 retained_intron Homo_sapiens 0 592

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