C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-acetylglutamate synthase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000293404 NAGS-001 ENSG00000161653 9606 + 17:44004546-44009060 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonHeartKidneyLungOvaryPlacentaTestisENST00000293404
Transcript ID Adrenal Bladder Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000293404 0.434±0.00 0.837±0.00 0.227±0.00 0.099±0.00 1.763±0.00 0.488±0.00 1.243±0.56 0.277±0.08 0.560±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EM CIL_0005EM_0001 CGP 17:43952738-44009063
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_00059K CIL_00059K_0001 CGP 17:44004546-44023946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000050 TAS urea cycle
GO:0004042 TAS acetyl-CoA:L-glutamate N-acetyltransferase activity
GO:0005759 TAS mitochondrial matrix
GO:0006526 IEA arginine biosynthetic process
GO:0006536 TAS glutamate metabolic process
GO:0008080 IEA N-acetyltransferase activity
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000055409 Nags-001 protein_coding Mus_musculus 0 1487
ENSMUST00000147252 Nags-002 processed_transcript Mus_musculus 0 1288
ENSMUST00000129799 Nags-003 processed_transcript Mus_musculus 0 592

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