C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 effector protein (Rho GTPase binding) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055458 Cdc42ep2-201 ENSMUSG00000045664 10090 - 19:5917556-5924816 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055458
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055458 30.179±7.45 8.289±0.64 25.761±0.68 6.005±1.98 19.537±3.65 8.911±1.96 11.385±0.62 12.243±0.35 4.091±1.58 27.482±2.46 9.988±2.03 9.064±3.88 9.351±3.96 0.805±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001515 IPI opioid peptide activity
GO:0005100 IEA Rho GTPase activator activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0008360 IEA regulation of cell shape
GO:0015630 IEA microtubule cytoskeleton
GO:0016020 IEA membrane
GO:0017049 IEA GTP-Rho binding
GO:0030036 IEA actin cytoskeleton organization
GO:0030838 IEA positive regulation of actin filament polymerization
GO:0031274 IEA positive regulation of pseudopodium assembly
GO:0032321 IEA positive regulation of Rho GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000279249 CDC42EP2-001 protein_coding Homo_sapiens 0 664
ENST00000533419 CDC42EP2-002 protein_coding Homo_sapiens 0 664

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