C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 effector protein (Rho GTPase binding) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000279249 CDC42EP2-001 ENSG00000149798 9606 + 11:65314818-65322429 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000279249
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000279249 12.858±0.00 11.916±0.00 2.462±0.00 8.718±8.26 8.600±0.00 2.741±2.33 8.071±0.00 1.141±0.00 10.029±9.76 1.999±0.00 13.968±7.13 15.020±9.16 1.964±1.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0001 VISTA 11:65187233-65790923
CIL_0003XD CIL_0003XD_0002 CGP 11:65314818-65353249

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001515 IEA opioid peptide activity
GO:0005100 IMP Rho GTPase activator activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007015 NAS actin filament organization
GO:0008360 IDA regulation of cell shape
GO:0015630 IDA microtubule cytoskeleton
GO:0016020 IDA membrane
GO:0017049 IPI GTP-Rho binding
GO:0030036 IDA actin cytoskeleton organization
GO:0030838 IDA positive regulation of actin filament polymerization
GO:0031274 IDA positive regulation of pseudopodium assembly
GO:0031334 TAS positive regulation of protein complex assembly
GO:0032321 IMP positive regulation of Rho GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000055458 Cdc42ep2-201 protein_coding Mus_musculus 0 664

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