C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transformation related protein 63 regulated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056087 Tprg-001 ENSMUSG00000048399 10090 + 16:25286817-25422344 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLungMuscleOvaryPlacentaTestisENSMUST00000056087
Transcript ID Bladder Brain Breast Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000056087 0.188±0.02 0.022±0.00 0.276±0.19 0.114±0.05 1.177±0.92 0.063±0.01 0.149±0.06 0.019±0.02 0.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003W CIL_00003W_0002 CGP 16:24393350-25422344
CIL_0008HR CIL_0008HR_0002 VISTA 16:24955379-25556208
CIL_0003Y5 CIL_0003Y5_0003 CGP 16:25286817-25892102

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345063 TPRG1-001 protein_coding Homo_sapiens 0 857
ENST00000425670 TPRG1-009 protein_coding Homo_sapiens 0 414
ENST00000433971 TPRG1-002 protein_coding Homo_sapiens 0 835

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