C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003Y5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056026-ENSDARG00000044356 CGP 7955 6:28466739-28628021
GeneTranscriptPositionBiotype
ENSDARG00000044356 (tp63)
tumor protein p63 		ENSDART00000065135 (tp63-002) 28591127-28628013 protein_coding
ENSDART00000065137 (tp63-001) 28591102-28628021 protein_coding
ENSDART00000123189 (tp63-005) 28591112-28624640 protein_coding
ENSDART00000127965 (tp63-003) 28509576-28627336 protein_coding
ENSDART00000130799 (tp63-004) 28591237-28626964 protein_coding
ENSDARG00000056026 (tprg1)
tumor protein p63 regulated 1 		ENSDART00000078447 (tprg1-001) 28466739-28504115 protein_coding
ENSDART00000146574 (tprg1-002) 28466813-28503581 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003Y5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188001-ENSG00000073282 CGP 9606 3:188947214-189897279
GeneTranscriptPositionBiotype
ENSG00000073282 (TP63)
tumor protein p63 		ENST00000264731 (TP63-001) 189631427-189897279 protein_coding
ENST00000320472 (TP63-003) 189631488-189894702 protein_coding
ENST00000354600 (TP63-004) 189789660-189897268 protein_coding
ENST00000392460 (TP63-010) 189631516-189894221 protein_coding
ENST00000392461 (TP63-015) 189789801-189894231 protein_coding
ENST00000392463 (TP63-011) 189789801-189894221 protein_coding
ENST00000418709 (TP63-002) 189631488-189881496 protein_coding
ENST00000434928 (TP63-007) 189789675-189864268 protein_coding
ENST00000437221 (TP63-009) 189789801-189881496 protein_coding
ENST00000440651 (TP63-008) 189631516-189894502 protein_coding
ENST00000449992 (TP63-012) 189789801-189894502 protein_coding
ENST00000456148 (TP63-013) 189789801-189894502 protein_coding
ENST00000460036 (TP63-005) 189789695-189873575 retained_intron
ENST00000486398 (TP63-006) 189631416-189738896 retained_intron
ENSG00000188001 (TPRG1)
tumor protein p63 regulated 1 		ENST00000345063 (TPRG1-001) 189171974-189325304 protein_coding
ENST00000412373 (TPRG1-003) 189100121-189215383 protein_coding
ENST00000425670 (TPRG1-009) 189215300-189315693 protein_coding
ENST00000433971 (TPRG1-002) 188947214-189321061 protein_coding
ENST00000456832 (TPRG1-006) 189207374-189219665 protein_coding
ENST00000460613 (TPRG1-005) 189150654-189219662 processed_transcript
ENST00000464152 (TPRG1-013) 189132685-189151136 processed_transcript
ENST00000473790 (TPRG1-014) 189132564-189151118 processed_transcript
ENST00000479720 (TPRG1-010) 189120247-189127166 processed_transcript
ENST00000481307 (TPRG1-008) 189309894-189315595 processed_transcript
ENST00000485836 (TPRG1-007) 189267596-189320704 processed_transcript
ENST00000488841 (TPRG1-012) 189127058-189151136 processed_transcript
ENST00000493725 (TPRG1-004) 189207376-189212212 processed_transcript
ENST00000496671 (TPRG1-015) 188976754-189023814 processed_transcript
ENST00000497628 (TPRG1-011) 189121286-189127198 processed_transcript
ENSG00000230115 (TPRG1-AS2)
TPRG1 antisense RNA 2 		ENST00000425454 (TPRG1-AS2-001) 189238686-189240594 antisense
ENSG00000234076 (TPRG1-AS1)
TPRG1 antisense RNA 1 		ENST00000444488 (TPRG1-AS1-001) 188941715-188947639 lincRNA
ENSG00000236182 (RP11-297K7.1)
 ENST00000411493 (RP11-297K7.1-001) 188989382-188990135 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0003Y5_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048399-ENSMUSG00000022510 CGP 10090 16:25286817-25892102
GeneTranscriptPositionBiotype
ENSMUSG00000022510 (Trp63)
transformation related protein 63 		ENSMUST00000040231 (Trp63-001) 25801916-25892102 protein_coding
ENSMUST00000065523 (Trp63-201) 25683765-25892087 protein_coding
ENSMUST00000115304 (Trp63-005) 25801916-25867854 protein_coding
ENSMUST00000115305 (Trp63-006) 25801916-25877144 protein_coding
ENSMUST00000115306 (Trp63-002) 25801916-25892102 protein_coding
ENSMUST00000115307 (Trp63-004) 25683763-25821318 protein_coding
ENSMUST00000115308 (Trp63-202) 25683765-25877144 protein_coding
ENSMUST00000115310 (Trp63-003) 25683765-25892102 protein_coding
ENSMUSG00000048399 (Tprg)
transformation related protein 63 regulated 		ENSMUST00000056087 (Tprg-001) 25286817-25422344 protein_coding
ENSMUST00000128595 (Tprg-002) 25286821-25318235 retained_intron
ENSMUSG00000098103 (Gm27005)
predicted gene, 27005 		ENSMUST00000182783 (Gm27005-001) 25726696-25727616 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Y5_0001ENSDARG00000044356ENSDART00000065135ENSDART00000065137ENSDART00000123189ENSDART00000127965ENSDART00000130799ENSDARG00000056026ENSDART00000078447ENSDART00000146574CIL_0003Y5_0002ENSG00000073282ENST00000264731ENST00000320472ENST00000354600ENST00000392460ENST00000392461ENST00000392463ENST00000418709ENST00000434928ENST00000437221ENST00000440651ENST00000449992ENST00000456148ENST00000460036ENST00000486398ENSG00000188001ENST00000345063ENST00000412373ENST00000425670ENST00000433971ENST00000456832ENST00000460613ENST00000464152ENST00000473790ENST00000479720ENST00000481307ENST00000485836ENST00000488841ENST00000493725ENST00000496671ENST00000497628ENSG00000230115ENST00000425454ENSG00000234076ENST00000444488ENSG00000236182ENST00000411493CIL_0003Y5_0003ENSMUSG00000022510ENSMUST00000040231ENSMUST00000065523ENSMUST00000115304ENSMUST00000115305ENSMUST00000115306ENSMUST00000115307ENSMUST00000115308ENSMUST00000115310ENSMUSG00000048399ENSMUST00000056087ENSMUST00000128595ENSMUSG00000098103ENSMUST00000182783
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Y5_0001ENSDARG00000044356ENSDART00000065135ENSDART00000065137ENSDART00000123189ENSDART00000127965ENSDART00000130799ENSDARG00000056026ENSDART00000078447ENSDART00000146574CIL_0003Y5_0002ENSG00000073282ENST00000264731ENST00000320472ENST00000354600ENST00000392461ENST00000418709ENST00000434928ENST00000437221ENST00000440651ENST00000449992ENST00000456148ENST00000460036ENSG00000188001ENST00000345063ENST00000412373ENST00000425670ENST00000433971ENST00000456832ENST00000460613ENST00000479720ENST00000481307ENST00000485836ENST00000488841ENSG00000230115ENST00000425454ENSG00000234076ENST00000444488ENSG00000236182ENST00000411493CIL_0003Y5_0003ENSMUSG00000022510ENSMUST00000040231ENSMUST00000065523ENSMUST00000115304ENSMUST00000115305ENSMUST00000115306ENSMUST00000115308ENSMUST00000115310ENSMUSG00000048399ENSMUST00000056087ENSMUST00000128595ENSMUSG00000098103ENSMUST00000182783
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044356 ENSDART00000065135 N/A N/A N/A 1.805±0.00 N/A N/A 1.393±0.42 6.394±0.54 0.052±0.00 N/A N/A N/A N/A N/A
ENSDART00000065137 N/A N/A N/A N/A N/A N/A N/A 0.248±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000123189 N/A N/A N/A N/A N/A N/A 1.984±0.00 N/A N/A N/A 0.926±0.00 N/A N/A N/A
ENSDART00000127965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.560±0.00 N/A N/A N/A
ENSDART00000130799 N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A N/A N/A N/A N/A
ENSDARG00000056026 ENSDART00000078447 N/A N/A N/A 0.424±0.07 N/A N/A 2.277±0.77 19.737±6.40 0.253±0.00 N/A 0.753±0.00 N/A N/A N/A
ENSDART00000146574 N/A N/A N/A 0.100±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073282 ENST00000264731 N/A N/A N/A N/A 0.446±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.046±0.07
ENST00000320472 N/A 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000354600 N/A N/A N/A 0.011±0.00 2.347±0.00 0.018±0.00 N/A 0.066±0.00 0.511±0.51 0.749±0.00 N/A 1.544±0.60 2.444±1.07 1.399±0.00
ENST00000392460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392461 N/A N/A N/A 0.069±0.00 N/A N/A N/A 0.088±0.00 2.729±0.00 N/A N/A N/A N/A N/A
ENST00000392463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.102±0.00 N/A N/A N/A
ENST00000434928 N/A 0.533±0.00 N/A 0.348±0.00 N/A N/A N/A N/A 6.637±0.00 N/A N/A 2.236±0.00 N/A N/A
ENST00000437221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.812±6.10 N/A N/A N/A
ENST00000440651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.238±0.00
ENST00000449992 N/A N/A N/A 0.253±0.00 N/A 0.193±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.305±0.00 1.232±0.00 2.681±0.00 N/A
ENST00000460036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.599±0.00 N/A N/A
ENST00000486398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188001 ENST00000345063 N/A 0.051±0.00 0.074±0.00 0.032±0.02 1.229±0.00 0.113±0.00 0.091±0.00 0.815±0.00 N/A 0.561±0.29 0.442±0.33 0.241±0.10 0.070±0.02 N/A
ENST00000412373 N/A N/A N/A N/A 9.383±0.00 0.441±0.00 N/A N/A N/A N/A 1.941±1.61 N/A N/A N/A
ENST00000425670 N/A N/A N/A 0.300±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433971 N/A N/A N/A N/A N/A N/A 0.148±0.00 2.224±0.00 0.275±0.00 0.688±0.27 0.295±0.00 0.715±0.41 0.216±0.13 2.122±0.09
ENST00000456832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.723±0.00 N/A
ENST00000460613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A
ENST00000464152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479720 N/A N/A N/A N/A N/A N/A N/A N/A 1.182±0.00 4.641±0.00 N/A 2.351±0.00 N/A N/A
ENST00000481307 N/A N/A 0.503±0.00 N/A N/A N/A N/A 0.377±0.00 N/A N/A N/A N/A N/A N/A
ENST00000485836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.235±0.58
ENST00000488841 N/A 0.548±0.00 N/A 0.051±0.00 N/A 0.433±0.00 N/A N/A N/A N/A N/A 0.685±0.00 N/A N/A
ENST00000493725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230115 ENST00000425454 N/A 0.655±0.00 N/A N/A N/A 1.245±0.00 0.906±0.00 0.388±0.00 N/A 1.871±0.00 2.079±0.00 N/A N/A N/A
ENSG00000234076 ENST00000444488 N/A 0.432±0.00 N/A 0.162±0.00 N/A N/A 0.555±0.00 6.334±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000236182 ENST00000411493 0.037±0.00 0.019±0.00 N/A 0.020±0.00 0.036±0.02 N/A 0.018±0.00 N/A 0.036±0.00 0.444±0.00 N/A 0.110±0.00 0.164±0.09 0.022±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022510 ENSMUST00000040231 N/A 0.007±0.00 14.236±1.28 0.263±0.15 1.626±0.71 0.003±0.00 0.097±0.00 0.167±0.05 0.023±0.01 2.034±0.22 0.414±0.08 0.653±0.22 0.248±0.27 0.221±0.00
ENSMUST00000065523 N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A 0.138±0.00 N/A 0.030±0.00 N/A
ENSMUST00000115304 N/A 0.007±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115305 0.766±0.18 0.042±0.00 N/A 0.158±0.06 2.246±0.30 0.058±0.02 0.088±0.00 N/A 0.047±0.00 N/A 0.697±0.01 0.613±0.10 0.958±1.13 N/A
ENSMUST00000115306 0.738±0.18 0.079±0.06 9.190±0.59 0.182±0.01 1.992±0.61 0.013±0.00 N/A 0.200±0.05 0.011±0.01 0.535±0.24 0.375±0.07 0.603±0.20 0.735±0.75 0.447±0.00
ENSMUST00000115307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115308 N/A N/A N/A N/A N/A N/A 0.244±0.00 N/A 0.007±0.00 N/A N/A 0.357±0.18 N/A 0.114±0.02
ENSMUST00000115310 N/A N/A N/A 0.034±0.00 N/A N/A 0.064±0.02 0.104±0.05 N/A 0.395±0.00 0.332±0.08 0.742±0.33 N/A 0.393±0.07
ENSMUSG00000048399 ENSMUST00000056087 N/A N/A 0.188±0.02 0.022±0.00 0.276±0.19 N/A N/A 0.114±0.05 N/A 1.177±0.92 0.063±0.01 0.149±0.06 0.019±0.02 0.028±0.00
ENSMUST00000128595 0.035±0.00 N/A N/A 0.013±0.00 0.149±0.02 N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000098103 ENSMUST00000182783 N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.00

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