C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gap junction protein, alpha 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056517 Gja10-001 ENSMUSG00000051056 10090 - 4:32600644-32602760 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056517
Transcript ID Adipose Brain Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056517 0.019±0.00 0.013±0.00 0.027±0.01 0.053±0.04 0.026±0.00 0.011±0.00 0.024±0.01 0.016±0.00 0.150±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MG CIL_0008MG_0002 VISTA 4:32001903-32605410

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005243 IDA gap junction channel activity
GO:0005921 IDA gap junction
GO:0005922 IEA connexon complex
GO:0007154 IEA cell communication
GO:0007276 IDA gamete generation
GO:0007416 IMP synapse assembly
GO:0009416 IMP response to light stimulus
GO:0016021 IEA integral component of membrane
GO:0050908 IMP detection of light stimulus involved in visual perception
GO:0055085 IDA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369352 GJA10-001 protein_coding Homo_sapiens 0 1447

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