C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008MG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm720 VISTA 9606 6:89917263-90520553
GeneTranscriptPositionBiotype
ENSG00000112182 (BACH2)
BTB and CNC homology 1, basic leucine zipper transcription factor 2 		ENST00000257749 (BACH2-003) 89926529-90296742 protein_coding
ENST00000343122 (BACH2-005) 89931485-90296742 protein_coding
ENST00000406998 (BACH2-002) 90008602-90296742 protein_coding
ENST00000453877 (BACH2-007) 90008602-90296742 protein_coding
ENST00000470301 (BACH2-001) 90088961-90296742 processed_transcript
ENST00000472023 (BACH2-008) 90089066-90296742 processed_transcript
ENST00000481150 (BACH2-009) 90008090-90008827 processed_transcript
ENST00000493201 (BACH2-006) 90089054-90218245 processed_transcript
ENST00000494747 (BACH2-004) 90104365-90296742 processed_transcript
ENST00000537989 (BACH2-201) 89926529-90296908 protein_coding
ENSG00000135341 (MAP3K7)
mitogen-activated protein kinase kinase kinase 7 		ENST00000369320 (MAP3K7-006) 90515683-90553464 protein_coding
ENST00000369325 (MAP3K7-003) 90513573-90586883 protein_coding
ENST00000369327 (MAP3K7-004) 90513573-90586889 protein_coding
ENST00000369329 (MAP3K7-002) 90513573-90587045 protein_coding
ENST00000369332 (MAP3K7-001) 90513573-90587045 protein_coding
ENST00000479630 (MAP3K7-005) 90515634-90537218 processed_transcript
ENSG00000218730 (RP3-453I5.2)
 ENST00000404861 (RP3-453I5.2-001) 90116700-90117105 processed_pseudogene
ENSG00000222078 (RN7SKP110)
RNA, 7SK small nuclear pseudogene 110 		ENST00000410146 (RN7SKP110-201) 90001222-90001506 misc_RNA
ENSG00000232532 (RP11-63K6.7)
 ENST00000458201 (RP11-63K6.7-001) 89920196-89921760 antisense
ENSG00000260271 (RP1-45N11.1)
 ENST00000569865 (RP1-45N11.1-001) 90345219-90362632 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008MG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm720 VISTA 10090 4:32001903-32605410
GeneTranscriptPositionBiotype
ENSMUSG00000028284 (Map3k7)
mitogen-activated protein kinase kinase kinase 7 		ENSMUST00000037607 (Map3k7-001) 31964097-32023467 protein_coding
ENSMUST00000080933 (Map3k7-002) 31964120-32023467 protein_coding
ENSMUST00000108183 (Map3k7-003) 31964257-32023467 protein_coding
ENSMUST00000108184 (Map3k7-004) 31964263-32023467 protein_coding
ENSMUST00000126632 (Map3k7-008) 31981576-31992775 processed_transcript
ENSMUST00000131114 (Map3k7-005) 31977348-31988641 processed_transcript
ENSMUST00000131310 (Map3k7-009) 31992473-32019560 processed_transcript
ENSMUST00000143138 (Map3k7-006) 31979498-31985721 processed_transcript
ENSMUST00000147462 (Map3k7-007) 31985667-32015970 processed_transcript
ENSMUSG00000040270 (Bach2)
BTB and CNC homology 2 		ENSMUST00000037416 (Bach2-002) 32238950-32581199 protein_coding
ENSMUST00000108180 (Bach2-001) 32238804-32586104 protein_coding
ENSMUST00000125263 (Bach2-006) 32574931-32579838 processed_transcript
ENSMUST00000146748 (Bach2-005) 32501505-32502626 processed_transcript
ENSMUST00000149201 (Bach2-003) 32239077-32501636 processed_transcript
ENSMUST00000156430 (Bach2-004) 32247764-32317229 processed_transcript
ENSMUST00000171600 (Bach2-201) 32417435-32586108 protein_coding
ENSMUSG00000051056 (Gja10)
gap junction protein, alpha 10 		ENSMUST00000056517 (Gja10-001) 32600644-32602760 protein_coding
ENSMUSG00000082398 (Gm11927)
predicted gene 11927 		ENSMUST00000118472 (Gm11927-001) 32051738-32052914 processed_pseudogene
ENSMUSG00000083564 (Gm11929)
predicted gene 11929 		ENSMUST00000118175 (Gm11929-001) 32207148-32208092 processed_pseudogene
ENSMUSG00000083872 (Gm11928)
predicted gene 11928 		ENSMUST00000119323 (Gm11928-001) 32149786-32150222 processed_pseudogene
ENSMUSG00000084611 (Gm24371)
predicted gene, 24371 		ENSMUST00000122662 (Gm24371-201) 32514787-32515053 misc_RNA
ENSMUSG00000086150 (Bach2os)
BTB and CNC homology 2, opposite strand 		ENSMUST00000126225 (Bach2os-001) 32559680-32571662 antisense
ENSMUST00000136149 (Bach2os-003) 32563097-32571617 antisense
ENSMUST00000149084 (Bach2os-002) 32565639-32571708 antisense
ENSMUSG00000087049 (Bach2it1)
BTB and CNC homology 2, intronic transcript 1 		ENSMUST00000133451 (Bach2it1-001) 32251761-32265835 sense_intronic

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008MG_0001ENSG00000112182ENST00000257749ENST00000343122ENST00000406998ENST00000453877ENST00000470301ENST00000472023ENST00000481150ENST00000493201ENST00000494747ENST00000537989ENSG00000135341ENST00000369320ENST00000369325ENST00000369327ENST00000369329ENST00000369332ENST00000479630ENSG00000218730ENST00000404861ENSG00000222078ENST00000410146ENSG00000232532ENST00000458201ENSG00000260271ENST00000569865CIL_0008MG_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008MG_0001ENSG00000112182ENST00000257749ENST00000343122ENST00000453877ENST00000470301ENST00000537989ENSG00000135341ENST00000369320ENST00000369325ENST00000369327ENST00000369329ENST00000369332ENST00000479630ENSG00000218730ENST00000404861ENSG00000222078ENST00000410146ENSG00000232532ENST00000458201ENSG00000260271ENST00000569865CIL_0008MG_0002ENSMUSG00000028284ENSMUST00000037607ENSMUST00000080933ENSMUST00000108184ENSMUST00000131310ENSMUSG00000040270ENSMUST00000037416ENSMUST00000108180ENSMUST00000171600ENSMUSG00000051056ENSMUST00000056517ENSMUSG00000082398ENSMUST00000118472ENSMUSG00000083564ENSMUST00000118175ENSMUSG00000083872ENSMUST00000119323ENSMUSG00000084611ENSMUST00000122662ENSMUSG00000086150ENSMUST00000126225ENSMUSG00000087049ENSMUST00000133451
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112182 ENST00000257749 N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A 0.262±0.17 N/A 0.425±0.00
ENST00000343122 N/A N/A N/A N/A N/A 0.243±0.00 0.163±0.00 0.082±0.00 N/A N/A N/A 0.053±0.00 N/A 0.484±0.31
ENST00000406998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453877 N/A N/A N/A N/A N/A N/A N/A 1.227±0.00 N/A N/A N/A N/A N/A N/A
ENST00000470301 N/A N/A N/A N/A N/A N/A N/A 0.760±0.00 N/A N/A N/A N/A N/A N/A
ENST00000472023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537989 0.412±0.00 1.592±0.00 N/A 0.480±0.00 0.314±0.17 0.355±0.00 0.228±0.08 0.063±0.00 0.222±0.16 0.896±0.69 0.853±0.34 0.582±0.23 0.262±0.06 0.075±0.00
ENSG00000135341 ENST00000369320 N/A N/A 0.511±0.00 1.153±0.00 1.435±0.00 0.623±0.00 N/A 0.361±0.00 1.120±0.00 2.585±0.00 N/A N/A N/A N/A
ENST00000369325 N/A N/A N/A N/A N/A N/A N/A 0.861±0.00 N/A N/A N/A N/A N/A 0.948±0.00
ENST00000369327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.737±0.00 N/A N/A N/A
ENST00000369329 0.820±0.00 3.203±0.00 N/A 2.646±0.00 1.050±0.09 1.760±0.00 0.861±0.00 2.330±2.08 1.065±0.00 2.538±0.00 N/A 1.771±0.00 1.468±0.87 1.771±0.84
ENST00000369332 3.445±0.00 1.211±0.00 N/A 2.704±0.22 2.372±1.46 3.807±0.00 2.875±1.59 N/A 1.506±0.46 1.940±0.25 2.021±1.29 3.536±2.47 3.580±0.41 3.317±0.32
ENST00000479630 N/A 2.624±0.00 0.519±0.00 1.497±0.00 N/A 1.122±0.00 0.665±0.00 1.927±0.00 1.197±0.00 1.763±0.00 N/A 2.516±0.68 N/A 3.338±0.00
ENSG00000218730 ENST00000404861 N/A 0.329±0.00 N/A 0.133±0.00 0.557±0.00 0.206±0.00 N/A N/A N/A 0.337±0.00 N/A 0.463±0.00 N/A N/A
ENSG00000222078 ENST00000410146 N/A 0.142±0.00 N/A N/A N/A N/A 0.195±0.00 N/A N/A N/A N/A N/A N/A 0.229±0.00
ENSG00000232532 ENST00000458201 N/A N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A 0.060±0.00
ENSG00000260271 ENST00000569865 0.026±0.00 0.144±0.00 N/A 0.082±0.03 0.133±0.00 0.025±0.00 0.008±0.00 0.089±0.00 N/A 0.033±0.00 N/A 0.023±0.01 N/A 0.039±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028284 ENSMUST00000037607 6.660±0.92 8.035±2.62 5.546±0.67 2.748±1.30 6.457±1.47 10.522±0.64 5.577±1.09 8.940±1.24 7.014±1.69 6.230±1.19 N/A 9.119±3.27 6.561±3.94 3.596±1.58
ENSMUST00000080933 5.623±2.76 5.005±2.13 7.975±1.19 8.901±3.02 5.048±0.91 2.287±0.24 3.016±0.35 1.722±0.15 2.042±0.75 5.477±0.40 10.998±0.27 7.077±2.40 4.019±0.80 0.966±0.00
ENSMUST00000108183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108184 N/A N/A N/A N/A N/A N/A N/A N/A 3.599±0.25 N/A N/A N/A N/A N/A
ENSMUST00000126632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131310 N/A 13.169±2.10 N/A N/A 16.589±4.36 N/A N/A N/A 9.168±0.72 N/A N/A N/A N/A 11.072±0.53
ENSMUST00000143138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040270 ENSMUST00000037416 N/A N/A N/A N/A 1.422±0.00 0.576±0.02 0.293±0.00 N/A 0.620±0.00 N/A N/A 0.488±0.21 0.369±0.00 0.809±0.17
ENSMUST00000108180 0.931±0.49 0.194±0.00 0.484±0.09 5.693±0.98 2.418±0.88 0.319±0.11 0.239±0.12 0.476±0.22 0.421±0.27 1.649±0.51 0.370±0.13 0.412±0.15 0.334±0.20 N/A
ENSMUST00000125263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171600 N/A 0.371±0.10 0.191±0.00 3.371±2.18 2.268±0.32 0.606±0.15 0.119±0.00 0.357±0.25 0.527±0.29 1.067±0.36 0.168±0.06 0.905±0.37 0.687±0.43 0.160±0.12
ENSMUSG00000051056 ENSMUST00000056517 0.019±0.00 N/A N/A 0.013±0.00 N/A N/A N/A 0.027±0.01 0.053±0.04 0.026±0.00 0.011±0.00 0.024±0.01 0.016±0.00 0.150±0.07
ENSMUSG00000082398 ENSMUST00000118472 N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083564 ENSMUST00000118175 N/A N/A N/A N/A 0.119±0.09 0.104±0.04 N/A N/A 0.011±0.00 0.077±0.00 N/A N/A N/A N/A
ENSMUSG00000083872 ENSMUST00000119323 N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A 0.125±0.00
ENSMUSG00000084611 ENSMUST00000122662 N/A N/A 0.345±0.15 0.367±0.02 1.221±0.73 0.540±0.02 0.936±0.16 0.619±0.28 0.301±0.02 0.906±0.49 N/A N/A 0.049±0.00 N/A
ENSMUSG00000086150 ENSMUST00000126225 N/A 0.713±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.377±0.00 N/A 0.363±0.00
ENSMUST00000136149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087049 ENSMUST00000133451 0.332±0.00 N/A N/A 0.242±0.06 0.353±0.23 N/A 0.111±0.00 0.164±0.07 0.153±0.11 0.170±0.02 N/A 0.111±0.00 0.050±0.02 0.127±0.00

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