C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleiomorphic adenoma gene-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056924 Plagl2-001 ENSMUSG00000051413 10090 - 2:153227759-153241426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056924
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056924 2.954±1.65 2.819±0.33 3.044±0.58 2.717±1.86 3.716±0.87 9.689±0.49 1.176±0.08 1.875±0.24 5.859±6.27 5.424±0.47 0.865±0.21 3.999±0.79 3.635±1.79 6.672±3.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A4 CIL_0008A4_0002 VISTA 2:153181176-153785061
CIL_0006RY CIL_0006RY_0003 CGP 2:153227759-153270247

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005634 IDA nucleus
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0006629 IMP lipid metabolic process
GO:0009791 IMP post-embryonic development
GO:0034378 IMP chylomicron assembly
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:2001244 IDA positive regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246229 PLAGL2-001 protein_coding Homo_sapiens 0 4178
ENST00000510707 RP11-274J2.1-001 processed_pseudogene Homo_sapiens 0 1971

Loading