C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleiomorphic adenoma gene-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000246229 PLAGL2-001 ENSG00000126003 9606 - 20:32192503-32207791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000246229
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000246229 1.409±0.00 2.275±0.00 1.731±0.00 1.499±0.00 1.396±0.00 1.661±0.00 1.626±1.56 1.417±1.14 0.623±0.02 2.242±1.62 2.107±1.09 6.342±4.44 1.424±0.39 6.352±1.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071B CIL_00071B_0002 CGP 20:32109506-32207791
CIL_0006RY CIL_0006RY_0002 CGP 20:32192503-32238667

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IBA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006629 IEA lipid metabolic process
GO:0009791 IEA post-embryonic development
GO:0034378 IBA chylomicron assembly
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:2001244 IEA positive regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056924 Plagl2-001 protein_coding Mus_musculus 0 4178
ENSMUST00000109795 Plagl2-002 protein_coding Mus_musculus 0 3921
ENSDART00000115298 plagl2-001 protein_coding Danio_rerio 0 359

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