C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit J2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057110 Eif3j2-001 ENSMUSG00000043424 10090 - 18:43475418-43477796 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057110
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057110 0.415±0.39 0.954±0.82 2.172±2.00 1.101±1.33 0.687±0.22 0.386±0.22 0.424±0.39 0.609±0.25 2.042±3.66 0.558±0.18 0.416±0.13 0.896±1.06 1.491±2.20 0.522±0.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001731 IEA formation of translation preinitiation complex
GO:0003743 IEA translation initiation factor activity
GO:0005852 ISS eukaryotic translation initiation factor 3 complex
GO:0006446 IEA regulation of translational initiation
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0033290 IEA eukaryotic 48S preinitiation complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261868 EIF3J-001 protein_coding Homo_sapiens 0 2353
ENST00000424492 EIF3J-003 protein_coding Homo_sapiens 0 1735
ENST00000425861 RP11-65B23.3-001 processed_pseudogene Homo_sapiens 0 593
ENST00000448435 RP4-581F12.1-001 processed_pseudogene Homo_sapiens 0 326
ENST00000451571 RP11-159H20.3-001 processed_pseudogene Homo_sapiens 0 599
ENST00000466044 RP11-63E16.1-001 processed_pseudogene Homo_sapiens 0 854
ENST00000535391 EIF3J-002 protein_coding Homo_sapiens 0 712
ENST00000536248 EIF3J-004 protein_coding Homo_sapiens 0 446
ENST00000558053 EIF3J-006 retained_intron Homo_sapiens 0 569
ENST00000558353 EIF3J-007 nonsense_mediated_decay Homo_sapiens 0 1352

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