C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit J
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000535391 EIF3J-002 ENSG00000104131 9606 + 15:44537183-44561447 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonMuscleENST00000535391
Transcript ID Adipose Brain Colon Muscle
ENST00000535391 13.639±0.00 16.543±0.00 16.859±0.00 18.942±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000686 CIL_000686_0001 CGP 15:44427234-44563029
CIL_0004DI CIL_0004DI_0001 CGP 15:44537057-44663678

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001731 IEA formation of translation preinitiation complex
GO:0003743 IC:IEA translation initiation factor activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005852 IDA:IEA eukaryotic translation initiation factor 3 complex
GO:0006412 TAS translation
GO:0006413 IC translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0010467 TAS gene expression
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0033290 IEA eukaryotic 48S preinitiation complex
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028668 Eif3j1-001 protein_coding Mus_musculus 0 712
ENSMUST00000057110 Eif3j2-001 protein_coding Mus_musculus 0 712
ENSMUST00000142747 Eif3j1-002 processed_transcript Mus_musculus 0 193

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