C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cannabinoid receptor 1 (brain)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057188 Cnr1-001 ENSMUSG00000044288 10090 + 4:33924632-33948831 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057188
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057188 1.591±1.11 4.473±0.86 0.125±0.01 13.007±6.74 1.241±0.30 0.767±0.19 0.044±0.01 0.082±0.02 0.081±0.05 0.414±0.04 0.057±0.03 0.506±0.20 0.039±0.03 0.681±0.39

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002866 IEA positive regulation of acute inflammatory response to antigenic stimulus
GO:0004949 ISS cannabinoid receptor activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007188 ISS adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007283 IEA spermatogenesis
GO:0007413 IMP axonal fasciculation
GO:0007568 IEA aging
GO:0007584 IEA response to nutrient
GO:0007611 IEA learning or memory
GO:0007613 IEA memory
GO:0008144 IEA drug binding
GO:0010976 IEA positive regulation of neuron projection development
GO:0016021 IEA integral component of membrane
GO:0019216 IEA regulation of lipid metabolic process
GO:0019233 IEA sensory perception of pain
GO:0030424 IDA axon
GO:0030426 IDA growth cone
GO:0031622 IEA positive regulation of fever generation
GO:0031999 IEA negative regulation of fatty acid beta-oxidation
GO:0032228 IEA regulation of synaptic transmission, GABAergic
GO:0032496 IEA response to lipopolysaccharide
GO:0033004 IEA negative regulation of mast cell activation
GO:0033602 IEA negative regulation of dopamine secretion
GO:0035094 IEA response to nicotine
GO:0042220 IEA response to cocaine
GO:0042593 IPI glucose homeostasis
GO:0043065 IEA positive regulation of apoptotic process
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043271 IEA negative regulation of ion transport
GO:0043278 IEA response to morphine
GO:0045471 IEA response to ethanol
GO:0045759 IEA negative regulation of action potential
GO:0045776 IEA negative regulation of blood pressure
GO:0045777 IEA positive regulation of blood pressure
GO:0050796 IEA regulation of insulin secretion
GO:0051001 IEA negative regulation of nitric-oxide synthase activity
GO:0051966 IEA regulation of synaptic transmission, glutamatergic
GO:0060135 IEA maternal process involved in female pregnancy
GO:0060259 IEA regulation of feeding behavior
GO:0060405 IEA regulation of penile erection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000362094 CNR1-003 protein_coding Homo_sapiens 0 1552
ENST00000369499 CNR1-006 protein_coding Homo_sapiens 0 2468
ENST00000369501 CNR1-001 protein_coding Homo_sapiens 0 2728
ENST00000428600 CNR1-005 protein_coding Homo_sapiens 0 1923
ENST00000468898 CNR1-004 protein_coding Homo_sapiens 0 1628
ENST00000549890 CNR1-002 protein_coding Homo_sapiens 0 2183
ENST00000551417 CNR1-007 protein_coding Homo_sapiens 0 355

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