C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type XXVI, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057497 Col26a1-001 ENSMUSG00000004415 10090 - 5:136741759-136883121 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungMuscleOvaryTestisENSMUST00000057497
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Muscle Ovary Testis
ENSMUST00000057497 0.045±0.02 0.071±0.02 0.287±0.01 0.093±0.05 0.043±0.00 0.016±0.00 0.137±0.01 0.312±0.12 1.091±0.00 3.726±1.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005O9 CIL_0005O9_0002 CGP 5:136693146-136883209

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005581 IEA collagen trimer
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0010811 IDA positive regulation of cell-substrate adhesion
GO:0031012 IEA extracellular matrix

Homologs

No Homologs available.

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