C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth differentiation factor 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057613 Gdf6-001 ENSMUSG00000051279 10090 + 4:9844372-9862345 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057613
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057613 0.234±0.17 0.068±0.03 0.422±0.04 0.040±0.00 0.082±0.02 0.166±0.04 0.168±0.07 0.037±0.02 0.166±0.10 0.137±0.07 0.033±0.03 0.469±0.27 0.257±0.19 0.023±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005125 IEA cytokine activity
GO:0005615 IEA extracellular space
GO:0006915 ISS apoptotic process
GO:0008083 IEA growth factor activity
GO:0010862 IEA positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0030509 IDA BMP signaling pathway
GO:0032924 IEA activin receptor signaling pathway
GO:0040007 IEA growth
GO:0042803 IDA protein homodimerization activity
GO:0045666 IDA positive regulation of neuron differentiation
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0060389 IEA pathway-restricted SMAD protein phosphorylation
GO:1990009 ISS retinal cell apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000075517 gdf6a-001 protein_coding Danio_rerio 0 259
ENST00000287020 GDF6-001 protein_coding Homo_sapiens 0 1487
ENST00000620978 GDF6-201 protein_coding Homo_sapiens 0 673
ENST00000621429 GDF6-202 protein_coding Homo_sapiens 0 861

Loading