C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth differentiation factor 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000287020 GDF6-001 ENSG00000156466 9606 - 8:96142330-96160792 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000287020
Transcript ID Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000287020 0.129±0.12 0.277±0.00 0.129±0.00 0.134±0.00 0.108±0.00 0.016±0.00 0.027±0.00 0.013±0.00 3.392±0.00 0.503±0.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005125 IEA cytokine activity
GO:0005615 IEA extracellular space
GO:0006915 ISS apoptotic process
GO:0008083 IEA growth factor activity
GO:0010862 IDA positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0030509 IDA BMP signaling pathway
GO:0032924 IDA activin receptor signaling pathway
GO:0040007 IEA growth
GO:0042803 IEA protein homodimerization activity
GO:0045666 IEA positive regulation of neuron differentiation
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0060389 IDA pathway-restricted SMAD protein phosphorylation
GO:1990009 ISS retinal cell apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057613 Gdf6-001 protein_coding Mus_musculus 0 1487
ENSDART00000015051 gdf5-002 protein_coding Danio_rerio 0 289
ENSDART00000149343 gdf5-001 protein_coding Danio_rerio 0 289

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