C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058183 Ndufaf6-001 ENSMUSG00000050323 10090 - 4:11051045-11076204 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058183
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058183 1.175±0.31 5.327±4.78 3.358±0.42 4.516±0.97 1.170±0.65 2.199±0.99 3.476±1.35 6.371±1.56 5.589±1.87 0.508±0.00 6.368±0.76 3.089±1.48 5.034±2.85 0.322±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SX CIL_0006SX_0002 CGP 4:11051045-11174379

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0009058 IEA biosynthetic process
GO:0016740 IEA transferase activity
GO:0032981 IEA mitochondrial respiratory chain complex I assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000396111 NDUFAF6-001 protein_coding Homo_sapiens 0 902
ENST00000396113 NDUFAF6-003 protein_coding Homo_sapiens 0 902
ENST00000396124 NDUFAF6-004 protein_coding Homo_sapiens 0 968
ENST00000454358 NDUFAF6-002 nonsense_mediated_decay Homo_sapiens 0 937
ENST00000517976 NDUFAF6-010 nonsense_mediated_decay Homo_sapiens 0 652
ENST00000518258 NDUFAF6-005 nonsense_mediated_decay Homo_sapiens 0 658
ENST00000518608 NDUFAF6-013 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000519136 NDUFAF6-014 protein_coding Homo_sapiens 0 342
ENST00000519804 NDUFAF6-015 protein_coding Homo_sapiens 0 375
ENST00000520632 NDUFAF6-011 nonsense_mediated_decay Homo_sapiens 0 298
ENST00000520757 NDUFAF6-006 nonsense_mediated_decay Homo_sapiens 0 490
ENST00000522683 NDUFAF6-012 nonsense_mediated_decay Homo_sapiens 5.99756e-43 178
ENST00000523184 NDUFAF6-016 processed_transcript Homo_sapiens 4e-35 152
ENST00000523337 NDUFAF6-009 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000523378 NDUFAF6-008 protein_coding Homo_sapiens 0 484

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