C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C-type lectin domain family 9, member a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058352 Clec9a-001 ENSMUSG00000046080 10090 + 6:129408862-129424762 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058352
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058352 1.187±0.07 0.432±0.09 0.636±0.25 1.932±0.42 0.365±0.10 0.582±0.00 0.386±0.14 0.929±0.25 2.338±0.00 0.116±0.01 1.436±0.54 0.305±0.09 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TD CIL_0000TD_0002 CGP 6:129408862-129452000

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006898 ISS receptor-mediated endocytosis
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0050715 ISS positive regulation of cytokine secretion

Homologs

No Homologs available.

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