C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000TD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197992-ENSG00000150048 CGP 9606 12:10030677-10111627
GeneTranscriptPositionBiotype
ENSG00000150048 (CLEC1A)
C-type lectin domain family 1, member A 		ENST00000315330 (CLEC1A-001) 10069554-10098985 protein_coding
ENST00000414501 (CLEC1A-002) 10089127-10111627 protein_coding
ENST00000420265 (CLEC1A-004) 10070763-10098950 protein_coding
ENST00000457018 (CLEC1A-003) 10070483-10099014 protein_coding
ENST00000544104 (CLEC1A-006) 10081269-10099028 nonsense_mediated_decay
ENSG00000197992 (CLEC9A)
C-type lectin domain family 9, member A 		ENST00000355819 (CLEC9A-001) 10030677-10066027 protein_coding
ENST00000538482 (CLEC9A-003) 10060599-10063182 retained_intron
ENST00000544751 (CLEC9A-002) 10030678-10052835 processed_transcript
ENSG00000223042 (RN7SKP161)
RNA, 7SK small nuclear pseudogene 161 		ENST00000411110 (RN7SKP161-201) 10084186-10084490 misc_RNA
CIL_0000TD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046080-ENSMUSG00000033082 CGP 10090 6:129408862-129452000
GeneTranscriptPositionBiotype
ENSMUSG00000030159 (Clec1b)
C-type lectin domain family 1, member b 		ENSMUST00000032262 (Clec1b-001) 129397297-129405333 protein_coding
ENSMUST00000112079 (Clec1b-003) 129397610-129405259 protein_coding
ENSMUST00000112081 (Clec1b-002) 129397607-129405263 protein_coding
ENSMUST00000133061 (Clec1b-004) 129403550-129409335 retained_intron
ENSMUSG00000033082 (Clec1a)
C-type lectin domain family 1, member a 		ENSMUST00000037481 (Clec1a-201) 129426684-129452000 protein_coding
ENSMUSG00000046080 (Clec9a)
C-type lectin domain family 9, member a 		ENSMUST00000058352 (Clec9a-001) 129408862-129424762 protein_coding
ENSMUST00000088075 (Clec9a-002) 129408863-129422569 protein_coding
ENSMUST00000164513 (Clec9a-201) 129408862-129424764 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TD_0001ENSG00000150048ENST00000315330ENST00000414501ENST00000420265ENST00000457018ENST00000544104ENSG00000197992ENST00000355819ENST00000538482ENST00000544751ENSG00000223042ENST00000411110CIL_0000TD_0002ENSMUSG00000030159ENSMUST00000032262ENSMUST00000112079ENSMUST00000112081ENSMUST00000133061ENSMUSG00000033082ENSMUST00000037481ENSMUSG00000046080ENSMUST00000058352ENSMUST00000088075ENSMUST00000164513
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TD_0001ENSG00000150048ENST00000315330ENST00000420265ENST00000457018ENST00000544104ENSG00000197992ENST00000355819ENST00000538482ENST00000544751ENSG00000223042ENST00000411110CIL_0000TD_0002ENSMUSG00000030159ENSMUST00000032262ENSMUST00000112081ENSMUST00000133061ENSMUSG00000033082ENSMUST00000037481ENSMUSG00000046080ENSMUST00000058352ENSMUST00000088075ENSMUST00000164513
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150048 ENST00000315330 N/A N/A 0.167±0.00 0.132±0.00 N/A 0.046±0.00 N/A 0.170±0.00 0.631±0.00 N/A N/A 0.538±0.00 4.360±0.38 0.203±0.00
ENST00000414501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420265 N/A N/A N/A 0.240±0.00 N/A N/A 0.559±0.30 0.935±0.67 0.179±0.00 N/A N/A 0.922±0.00 30.031±0.00 1.685±0.95
ENST00000457018 2.645±0.00 3.772±0.00 N/A 0.330±0.00 2.195±1.02 4.431±0.00 0.794±0.00 0.940±0.00 1.172±0.00 25.005±0.00 1.181±0.00 1.242±0.98 21.626±4.96 1.416±0.46
ENST00000544104 N/A N/A N/A 0.645±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197992 ENST00000355819 N/A 0.138±0.00 0.054±0.00 0.381±0.07 0.078±0.06 0.119±0.00 0.092±0.03 0.101±0.07 0.054±0.00 0.218±0.00 N/A 0.131±0.02 0.096±0.04 1.084±0.00
ENST00000538482 N/A N/A N/A N/A N/A N/A 0.086±0.00 0.061±0.00 N/A 0.304±0.00 N/A N/A N/A N/A
ENST00000544751 N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000223042 ENST00000411110 N/A N/A N/A N/A 0.155±0.09 N/A N/A N/A N/A 0.699±0.41 N/A 0.943±0.00 N/A 0.420±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030159 ENSMUST00000032262 N/A 0.349±0.15 N/A 0.390±0.17 N/A N/A 1.440±0.49 N/A 6.043±3.95 N/A N/A N/A 2.805±1.56 N/A
ENSMUST00000112079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112081 N/A N/A N/A N/A N/A N/A N/A N/A 3.241±0.18 N/A N/A N/A 1.751±0.00 0.132±0.00
ENSMUST00000133061 N/A 0.165±0.05 N/A N/A N/A N/A N/A 0.133±0.00 0.521±0.07 N/A 0.020±0.01 0.395±0.10 0.087±0.02 0.025±0.02
ENSMUSG00000033082 ENSMUST00000037481 1.494±0.53 2.141±0.40 0.428±0.10 0.212±0.03 1.976±0.27 0.761±0.28 1.790±0.38 1.752±0.12 0.261±0.14 26.326±4.89 0.376±0.09 5.452±2.25 2.609±2.01 0.014±0.01
ENSMUSG00000046080 ENSMUST00000058352 1.187±0.07 0.432±0.09 0.636±0.25 N/A 1.932±0.42 0.365±0.10 0.582±0.00 0.386±0.14 0.929±0.25 2.338±0.00 0.116±0.01 1.436±0.54 0.305±0.09 0.033±0.00
ENSMUST00000088075 N/A 0.287±0.06 N/A N/A N/A 0.266±0.00 N/A N/A N/A N/A N/A 1.111±0.00 N/A 0.059±0.00
ENSMUST00000164513 N/A 0.187±0.05 N/A 0.084±0.00 N/A 0.405±0.13 N/A 0.095±0.00 0.351±0.00 N/A 0.156±0.07 1.609±0.86 0.926±0.00 0.011±0.00

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