C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000TD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197992-ENSG00000150048 CGP 9606 12:10030677-10111627
GeneTranscriptPositionBiotype
ENSG00000150048 (CLEC1A)
C-type lectin domain family 1, member A 		ENST00000315330 (CLEC1A-001) 10069554-10098985 protein_coding
ENST00000414501 (CLEC1A-002) 10089127-10111627 protein_coding
ENST00000420265 (CLEC1A-004) 10070763-10098950 protein_coding
ENST00000457018 (CLEC1A-003) 10070483-10099014 protein_coding
ENST00000544104 (CLEC1A-006) 10081269-10099028 nonsense_mediated_decay
ENSG00000197992 (CLEC9A)
C-type lectin domain family 9, member A 		ENST00000355819 (CLEC9A-001) 10030677-10066027 protein_coding
ENST00000538482 (CLEC9A-003) 10060599-10063182 retained_intron
ENST00000544751 (CLEC9A-002) 10030678-10052835 processed_transcript
ENSG00000223042 (RN7SKP161)
RNA, 7SK small nuclear pseudogene 161 		ENST00000411110 (RN7SKP161-201) 10084186-10084490 misc_RNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0000TD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046080-ENSMUSG00000033082 CGP 10090 6:129408862-129452000
GeneTranscriptPositionBiotype
ENSMUSG00000030159 (Clec1b)
C-type lectin domain family 1, member b 		ENSMUST00000032262 (Clec1b-001) 129397297-129405333 protein_coding
ENSMUST00000112079 (Clec1b-003) 129397610-129405259 protein_coding
ENSMUST00000112081 (Clec1b-002) 129397607-129405263 protein_coding
ENSMUST00000133061 (Clec1b-004) 129403550-129409335 retained_intron
ENSMUSG00000033082 (Clec1a)
C-type lectin domain family 1, member a 		ENSMUST00000037481 (Clec1a-201) 129426684-129452000 protein_coding
ENSMUSG00000046080 (Clec9a)
C-type lectin domain family 9, member a 		ENSMUST00000058352 (Clec9a-001) 129408862-129424762 protein_coding
ENSMUST00000088075 (Clec9a-002) 129408863-129422569 protein_coding
ENSMUST00000164513 (Clec9a-201) 129408862-129424764 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TD_0001ENSG00000150048ENST00000315330ENST00000414501ENST00000420265ENST00000457018ENST00000544104ENSG00000197992ENST00000355819ENST00000538482ENST00000544751ENSG00000223042ENST00000411110CIL_0000TD_0002ENSMUSG00000030159ENSMUST00000032262ENSMUST00000112079ENSMUST00000112081ENSMUST00000133061ENSMUSG00000033082ENSMUST00000037481ENSMUSG00000046080ENSMUST00000058352ENSMUST00000088075ENSMUST00000164513
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TD_0001ENSG00000150048ENST00000315330ENST00000420265ENST00000457018ENST00000544104ENSG00000197992ENST00000355819ENST00000538482ENST00000544751ENSG00000223042ENST00000411110CIL_0000TD_0002ENSMUSG00000030159ENSMUST00000032262ENSMUST00000112081ENSMUST00000133061ENSMUSG00000033082ENSMUST00000037481ENSMUSG00000046080ENSMUST00000058352ENSMUST00000088075ENSMUST00000164513
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150048 ENST00000315330 N/A N/A 0.167±0.00 0.132±0.00 N/A 0.046±0.00 N/A 0.170±0.00 0.631±0.00 N/A N/A 0.538±0.00 4.360±0.38 0.203±0.00
ENST00000414501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420265 N/A N/A N/A 0.240±0.00 N/A N/A 0.559±0.30 0.935±0.67 0.179±0.00 N/A N/A 0.922±0.00 30.031±0.00 1.685±0.95
ENST00000457018 2.645±0.00 3.772±0.00 N/A 0.330±0.00 2.195±1.02 4.431±0.00 0.794±0.00 0.940±0.00 1.172±0.00 25.005±0.00 1.181±0.00 1.242±0.98 21.626±4.96 1.416±0.46
ENST00000544104 N/A N/A N/A 0.645±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197992 ENST00000355819 N/A 0.138±0.00 0.054±0.00 0.381±0.07 0.078±0.06 0.119±0.00 0.092±0.03 0.101±0.07 0.054±0.00 0.218±0.00 N/A 0.131±0.02 0.096±0.04 1.084±0.00
ENST00000538482 N/A N/A N/A N/A N/A N/A 0.086±0.00 0.061±0.00 N/A 0.304±0.00 N/A N/A N/A N/A
ENST00000544751 N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000223042 ENST00000411110 N/A N/A N/A N/A 0.155±0.09 N/A N/A N/A N/A 0.699±0.41 N/A 0.943±0.00 N/A 0.420±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030159 ENSMUST00000032262 N/A 0.349±0.15 N/A 0.390±0.17 N/A N/A 1.440±0.49 N/A 6.043±3.95 N/A N/A N/A 2.805±1.56 N/A
ENSMUST00000112079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112081 N/A N/A N/A N/A N/A N/A N/A N/A 3.241±0.18 N/A N/A N/A 1.751±0.00 0.132±0.00
ENSMUST00000133061 N/A 0.165±0.05 N/A N/A N/A N/A N/A 0.133±0.00 0.521±0.07 N/A 0.020±0.01 0.395±0.10 0.087±0.02 0.025±0.02
ENSMUSG00000033082 ENSMUST00000037481 1.494±0.53 2.141±0.40 0.428±0.10 0.212±0.03 1.976±0.27 0.761±0.28 1.790±0.38 1.752±0.12 0.261±0.14 26.326±4.89 0.376±0.09 5.452±2.25 2.609±2.01 0.014±0.01
ENSMUSG00000046080 ENSMUST00000058352 1.187±0.07 0.432±0.09 0.636±0.25 N/A 1.932±0.42 0.365±0.10 0.582±0.00 0.386±0.14 0.929±0.25 2.338±0.00 0.116±0.01 1.436±0.54 0.305±0.09 0.033±0.00
ENSMUST00000088075 N/A 0.287±0.06 N/A N/A N/A 0.266±0.00 N/A N/A N/A N/A N/A 1.111±0.00 N/A 0.059±0.00
ENSMUST00000164513 N/A 0.187±0.05 N/A 0.084±0.00 N/A 0.405±0.13 N/A 0.095±0.00 0.351±0.00 N/A 0.156±0.07 1.609±0.86 0.926±0.00 0.011±0.00

Loading