C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058652 Hs3st3a1-001 ENSMUSG00000047759 10090 + 11:64435332-64522841 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058652 0.197±0.11 0.105±0.04 0.057±0.00 0.513±0.41 0.612±0.28 0.732±0.14 0.160±0.03 0.749±0.09 0.298±0.13 0.606±0.21 0.133±0.04 0.977±0.40 0.058±0.04 0.066±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0008467 IEA [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000125900 hs3st3b1b-001 protein_coding Danio_rerio 0 507
ENSDART00000105484 si:ch211-216b21.2-201 protein_coding Danio_rerio 0 462
ENST00000284110 HS3ST3A1-001 protein_coding Homo_sapiens 0 1297
ENST00000360954 HS3ST3B1-001 protein_coding Homo_sapiens 0 965
ENST00000466596 HS3ST3B1-002 nonsense_mediated_decay Homo_sapiens 0 965
ENST00000578576 HS3ST3A1-002 protein_coding Homo_sapiens 0 773

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