C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: death effector domain-containing DNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058702 Dedd2-201 ENSMUSG00000054499 10090 - 7:25202840-25219859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058702
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058702 4.958±1.07 7.525±2.75 3.514±0.24 3.440±2.51 9.573±2.01 17.220±1.48 6.512±2.52 10.792±3.60 12.267±9.26 9.784±1.41 1.771±0.80 6.513±2.14 14.499±6.77 12.286±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003X4 CIL_0003X4_0002 CGP 7:25087344-25219859
CIL_00028B CIL_00028B_0002 CGP 7:25202840-25227507

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005634 ISA nucleus
GO:0005730 IEA nucleolus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 RCA apoptotic process
GO:0008625 IEA extrinsic apoptotic signaling pathway via death domain receptors
GO:0030262 IEA apoptotic nuclear changes
GO:0042981 RCA regulation of apoptotic process
GO:2001238 IEA positive regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336034 DEDD2-011 protein_coding Homo_sapiens 0 1194
ENST00000593561 DEDD2-004 processed_transcript Homo_sapiens 8.99998e-41 171
ENST00000593804 DEDD2-002 processed_transcript Homo_sapiens 0 774
ENST00000595337 DEDD2-001 protein_coding Homo_sapiens 0 1264
ENST00000596251 DEDD2-003 protein_coding Homo_sapiens 0 1267
ENST00000598090 DEDD2-007 processed_transcript Homo_sapiens 8.00001e-41 171
ENST00000598200 DEDD2-013 protein_coding Homo_sapiens 0 610
ENST00000598415 DEDD2-006 processed_transcript Homo_sapiens 0 388
ENST00000598727 DEDD2-010 protein_coding Homo_sapiens 0 660
ENST00000600559 DEDD2-012 processed_transcript Homo_sapiens 0 435
ENST00000601135 DEDD2-008 processed_transcript Homo_sapiens 0 590
ENST00000602075 DEDD2-009 processed_transcript Homo_sapiens 0 350
ENST00000602201 DEDD2-005 processed_transcript Homo_sapiens 8.99998e-41 171

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