C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methionine adenosyltransferase II, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059472 Mat2a-201 ENSMUSG00000053907 10090 - 6:72432799-72439558 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059472
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059472 58.326±1.83 34.589±3.64 76.931±15.82 78.624±54.76 47.661±6.02 57.509±3.20 42.079±2.56 68.957±4.93 41.759±33.30 57.354±4.20 54.963±11.40 41.912±11.97 38.208±18.69 21.573±9.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WR CIL_0007WR_0002 VISTA 6:71915186-72518828
CIL_00084P CIL_00084P_0002 VISTA 6:71915200-72518764
CIL_0009AX CIL_0009AX_0002 VISTA 6:72353769-72955984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004478 IDA methionine adenosyltransferase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006556 IEA S-adenosylmethionine biosynthetic process
GO:0006730 IEA one-carbon metabolic process
GO:0046872 IEA metal ion binding
GO:0048269 IEA methionine adenosyltransferase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000121531 mat2aa-001 protein_coding Danio_rerio 0 758
ENSDART00000112201 mat2aa-201 protein_coding Danio_rerio 0 536
ENST00000233838 GGCX-001 protein_coding Homo_sapiens 0 966
ENST00000306434 MAT2A-001 protein_coding Homo_sapiens 0 3960
ENST00000409017 MAT2A-007 protein_coding Homo_sapiens 0 1448
ENST00000465151 MAT2A-010 retained_intron Homo_sapiens 0 226
ENST00000469221 MAT2A-011 retained_intron Homo_sapiens 0 405
ENST00000477975 RP11-572C15.3-002 unprocessed_pseudogene Homo_sapiens 0 224
ENST00000481412 MAT2A-006 retained_intron Homo_sapiens 0 959
ENST00000551090 RP11-603K19.1-001 processed_pseudogene Homo_sapiens 0 1423

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