C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanosine diphosphate (GDP) dissociation inhibitor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059515 Gdi2-201 ENSMUSG00000021218 10090 + 13:3538075-3566261 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059515
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059515 37.352±17.06 56.465±2.02 60.611±4.97 53.636±21.28 43.942±7.63 42.511±2.47 21.292±3.57 45.404±6.89 43.373±3.67 33.612±2.41 15.349±5.36 59.363±20.93 102.857±40.82 52.431±3.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HB CIL_0008HB_0002 VISTA 13:3426204-4027216
CIL_00097T CIL_00097T_0002 VISTA 13:3441069-4044545

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005093 IEA Rab GDP-dissociation inhibitor activity
GO:0005097 IPI Rab GTPase activator activity
GO:0005515 IEA protein binding
GO:0005794 IPI Golgi apparatus
GO:0005925 IEA focal adhesion
GO:0007264 IPI small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0031267 IEA small GTPase binding
GO:0031982 IEA vesicle
GO:0032851 IPI positive regulation of Rab GTPase activity
GO:0044822 IEA poly(A) RNA binding
GO:0050790 IEA regulation of catalytic activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380127 GDI2-007 protein_coding Homo_sapiens 0 466
ENST00000380181 GDI2-002 protein_coding Homo_sapiens 0 1247
ENST00000380191 GDI2-001 protein_coding Homo_sapiens 0 1855
ENST00000418688 GDI2-004 protein_coding Homo_sapiens 0 497
ENST00000429312 GDI2P1-001 processed_pseudogene Homo_sapiens 0 1367
ENST00000447751 GDI2-003 protein_coding Homo_sapiens 0 616
ENST00000456041 GDI2-005 protein_coding Homo_sapiens 0 647
ENST00000479928 GDI2-006 processed_transcript Homo_sapiens 0 418
ENST00000608581 GDI2-008 protein_coding Homo_sapiens 0 499
ENST00000609712 GDI2-009 protein_coding Homo_sapiens 6e-18 95

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