C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GDP dissociation inhibitor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380191 GDI2-001 ENSG00000057608 9606 - 10:5765223-5813549 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380191
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380191 101.523±0.00 64.477±0.00 21.865±0.00 48.698±7.91 69.502±14.10 59.633±4.76 22.012±7.30 68.552±3.24 51.415±7.63 52.002±4.20 44.551±31.23 85.586±7.88 69.770±11.68 56.155±27.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097T CIL_00097T_0001 VISTA 10:5274654-5878045
CIL_0008HB CIL_0008HB_0001 VISTA 10:5286025-5887846

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005093 IEA Rab GDP-dissociation inhibitor activity
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IPI protein binding
GO:0005737 TAS cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005829 TAS cytosol
GO:0005925 IDA focal adhesion
GO:0007165 TAS signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0031267 IEA small GTPase binding
GO:0031982 IDA vesicle
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0044822 IDA poly(A) RNA binding
GO:0050790 IEA regulation of catalytic activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059515 Gdi2-201 protein_coding Mus_musculus 0 1855
ENSMUST00000185647 RP23-219C1.1-001 processed_pseudogene Mus_musculus 0 802

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