C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2Q (putative) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059555 Ube2q2-001 ENSMUSG00000032307 10090 + 9:55148854-55207529 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059555
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059555 4.861±0.28 2.915±1.05 12.844±0.68 6.821±2.33 5.487±0.64 1.812±0.35 2.598±0.23 4.203±0.43 2.652±1.83 2.812±0.62 6.736±2.51 3.971±2.50 13.397±1.92 5.779±1.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024C CIL_00024C_0002 CGP 9:55148854-55224433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0016881 IEA acid-amino acid ligase activity
GO:0070936 ISS protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124645 ube2q2-202 protein_coding Danio_rerio 0 551
ENSDART00000155676 ube2q2-002 protein_coding Danio_rerio 0 490
ENSDART00000155506 ube2q2-001 nonsense_mediated_decay Danio_rerio 0 381
ENSDART00000016117 ube2q2-201 protein_coding Danio_rerio 5e-16 92
ENSDART00000017798 ube2q1-201 protein_coding Danio_rerio 0.00000003 66
ENSDART00000097333 ube2q1-202 protein_coding Danio_rerio 0.00000003 66
ENST00000267938 UBE2Q2-001 protein_coding Homo_sapiens 0 2584
ENST00000339094 UBE2Q2P1-002 processed_transcript Homo_sapiens 0 366
ENST00000354771 UBE2Q2P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 573
ENST00000413867 UBE2Q2P5Y-001 unprocessed_pseudogene Homo_sapiens 0 255
ENST00000426727 UBE2Q2-004 protein_coding Homo_sapiens 0 870
ENST00000433767 UBE2Q2P4Y-001 unprocessed_pseudogene Homo_sapiens 0 255
ENST00000473125 GOLGA8A-002 retained_intron Homo_sapiens 2e-36 159
ENST00000484716 GOLGA8B-002 retained_intron Homo_sapiens 2e-36 159
ENST00000490086 UBE2Q2P9-001 processed_pseudogene Homo_sapiens 3.00004e-41 171
ENST00000514854 UBE2Q2P10-001 processed_pseudogene Homo_sapiens 0 1037
ENST00000558251 UBE2Q2P1-004 processed_transcript Homo_sapiens 0 366
ENST00000559010 UBE2Q2P1-005 retained_intron Homo_sapiens 2e-16 90
ENST00000559958 UBE2Q2P1-006 processed_transcript Homo_sapiens 1e-21 106
ENST00000561403 UBE2Q2P1-007 processed_transcript Homo_sapiens 0 209
ENST00000561723 UBE2Q2-008 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000561851 UBE2Q2-003 protein_coding Homo_sapiens 0 1598
ENST00000562282 GOLGA8B-011 processed_transcript Homo_sapiens 2e-37 159
ENST00000562635 UBE2Q2-005 processed_transcript Homo_sapiens 3e-35 152
ENST00000563966 UBE2Q2-007 processed_transcript Homo_sapiens 0 582
ENST00000564575 GOLGA8B-006 processed_transcript Homo_sapiens 2e-38 163
ENST00000567921 UBE2Q2-006 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000569100 GOLGA8B-004 retained_intron Homo_sapiens 2e-36 159
ENST00000569423 UBE2Q2-002 protein_coding Homo_sapiens 0 1934
ENST00000613592 UBE2Q2P2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 387

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