C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2Q family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000267938 UBE2Q2-001 ENSG00000140367 9606 + 15:75843285-75901078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267938
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267938 7.104±0.00 5.738±0.00 3.199±1.27 4.326±1.15 8.241±5.92 3.478±2.68 3.097±2.74 1.205±0.07 7.696±0.00 2.944±0.00 4.896±3.03 6.518±1.84 6.914±3.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024C CIL_00024C_0001 CGP 15:75843285-75942510

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0016881 IEA acid-amino acid ligase activity
GO:0070936 IDA protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059555 Ube2q2-001 protein_coding Mus_musculus 0 2584
ENSMUST00000122441 Ube2q2-003 protein_coding Mus_musculus 0 1892
ENSMUST00000181646 Gm4895-001 processed_pseudogene Mus_musculus 0 1615
ENSMUST00000121677 Ube2q2-004 protein_coding Mus_musculus 0 1447
ENSDART00000124645 ube2q2-202 protein_coding Danio_rerio 0 555
ENSMUST00000148468 Ube2q2-002 retained_intron Mus_musculus 0 542
ENSDART00000155676 ube2q2-002 protein_coding Danio_rerio 0 496
ENSDART00000155506 ube2q2-001 nonsense_mediated_decay Danio_rerio 0 398
ENSDART00000016117 ube2q2-201 protein_coding Danio_rerio 0.00000000001 77
ENSDART00000017798 ube2q1-201 protein_coding Danio_rerio 0.00000003 66
ENSDART00000097333 ube2q1-202 protein_coding Danio_rerio 0.00000003 66

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