C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 216
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059582 Tmem216-002 ENSMUSG00000024667 10090 - 19:10550492-10555751 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000059582
Transcript ID Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000059582 20.371±4.62 11.314±1.26 5.219±0.63 12.673±0.62 13.969±2.14 14.045±0.86 15.087±1.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0002 VISTA 19:10121785-10724671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005929 ISS cilium
GO:0016021 IEA integral component of membrane
GO:0035869 IMP ciliary transition zone
GO:0036038 IDA TCTN-B9D complex
GO:0042384 ISS cilium assembly
GO:0060271 IMP cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334888 TMEM216-201 protein_coding Homo_sapiens 0 573
ENST00000398979 TMEM216-004 protein_coding Homo_sapiens 0 525
ENST00000515837 TMEM216-001 protein_coding Homo_sapiens 0 553
ENST00000544795 TMEM216-003 retained_intron Homo_sapiens 0 243

Loading