C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 216
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334888 TMEM216-201 ENSG00000187049 9606 + 11:61392360-61398863 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334888
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334888 3.697±0.00 5.967±0.00 0.628±0.00 0.985±0.03 2.028±1.37 2.460±1.49 0.754±0.69 3.778±0.00 2.043±1.03 3.168±1.39 1.103±0.29 8.762±6.42 4.949±3.24 6.527±3.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0001 VISTA 11:61244303-61847279

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005929 IDA cilium
GO:0016021 IEA integral component of membrane
GO:0036038 ISS TCTN-B9D complex
GO:0042384 IMP cilium assembly
GO:0060271 ISS cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154383 Tmem216-004 protein_coding Mus_musculus 0 608
ENSMUST00000059582 Tmem216-002 protein_coding Mus_musculus 0 573
ENSMUST00000025569 Tmem216-001 protein_coding Mus_musculus 0 571
ENSMUST00000123788 Tmem216-005 protein_coding Mus_musculus 0 490
ENSMUST00000145210 Tmem216-003 protein_coding Mus_musculus 0 455

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