C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 effector protein (Rho GTPase binding) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059619 Cdc42ep1-201 ENSMUSG00000049521 10090 + 15:78842647-78850902 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059619
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059619 87.171±48.33 44.528±6.46 10.244±0.58 3.697±0.54 43.511±15.06 22.958±1.14 20.139±4.90 23.301±2.20 12.598±4.10 102.647±19.39 4.563±0.61 31.291±8.95 11.650±2.78 0.975±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040G CIL_00040G_0002 CGP 15:78775138-78850902
CIL_00040F CIL_00040F_0002 CGP 15:78842647-78855529

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0005925 IEA focal adhesion
GO:0007266 IDA Rho protein signal transduction
GO:0008360 IEA regulation of cell shape
GO:0015629 IEA actin cytoskeleton
GO:0031274 IEA positive regulation of pseudopodium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249014 CDC42EP1-001 protein_coding Homo_sapiens 0 573

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