C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinesin family member 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060537 Kif1b-001 ENSMUSG00000063077 10090 - 4:149176319-149307692 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLiverLungMuscleTestisENSMUST00000060537
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Liver Lung Muscle Testis
ENSMUST00000060537 9.728±0.90 7.726±2.58 2.845±0.00 37.581±7.54 5.056±0.18 3.328±0.33 5.494±0.45 9.287±0.00 13.024±1.12 0.986±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082Y CIL_00082Y_0002 VISTA 4:148576108-149176659
CIL_00085P CIL_00085P_0002 VISTA 4:148597228-149198219
CIL_0007WE CIL_0007WE_0002 VISTA 4:148621504-149222572
CIL_0008IM CIL_0008IM_0002 VISTA 4:148744049-149345133
CIL_0003MR CIL_0003MR_0002 CGP 4:149149991-149307693
CIL_0006QX CIL_0006QX_0002 CGP 4:149176319-149426749

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003777 IDA microtubule motor activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005739 ISO mitochondrion
GO:0005871 IBA kinesin complex
GO:0005874 IEA microtubule
GO:0005875 IDA microtubule associated complex
GO:0006200 IDA ATP catabolic process
GO:0007018 IDA microtubule-based movement
GO:0007270 IMP neuron-neuron synaptic transmission
GO:0007274 IMP neuromuscular synaptic transmission
GO:0008017 TAS microtubule binding
GO:0008089 IMP anterograde axon cargo transport
GO:0008152 IBA metabolic process
GO:0008574 IBA plus-end-directed microtubule motor activity
GO:0009790 NAS embryo development
GO:0016192 IBA vesicle-mediated transport
GO:0016887 IDA ATPase activity
GO:0030659 IDA cytoplasmic vesicle membrane
GO:0030705 IDA cytoskeleton-dependent intracellular transport
GO:0031410 ISS cytoplasmic vesicle
GO:0043005 ISS neuron projection
GO:0047497 IDA mitochondrion transport along microtubule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000053807 kif1b-202 protein_coding Danio_rerio 0 680
ENSDART00000146458 kif1b-001 protein_coding Danio_rerio 0 680
ENSDART00000050915 kif1b-201 protein_coding Danio_rerio 0 667
ENSDART00000141075 kif1b-002 protein_coding Danio_rerio 0 667
ENST00000263934 KIF1B-002 protein_coding Homo_sapiens 0 5568
ENST00000377081 KIF1B-005 protein_coding Homo_sapiens 0 7254
ENST00000377083 KIF1B-004 protein_coding Homo_sapiens 0 1594
ENST00000377086 KIF1B-001 protein_coding Homo_sapiens 0 7472
ENST00000377093 KIF1B-003 protein_coding Homo_sapiens 0 1642
ENST00000465635 KIF1B-008 processed_transcript Homo_sapiens 0 760
ENST00000470616 KIF1B-010 retained_intron Homo_sapiens 7e-22 108
ENST00000483340 KIF1B-009 retained_intron Homo_sapiens 0 760
ENST00000495136 KIF1B-006 retained_intron Homo_sapiens 1.99965e-42 176
ENST00000497835 KIF1B-007 retained_intron Homo_sapiens 0 339
ENST00000620295 KIF1B-201 protein_coding Homo_sapiens 0 5483
ENST00000622724 KIF1B-202 protein_coding Homo_sapiens 0 5350

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