C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: claudin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060651 Cldn7-004 ENSMUSG00000018569 10090 + 11:69964824-69966969 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalMuscleENSMUST00000060651
Transcript ID Adipose Adrenal Muscle
ENSMUST00000060651 0.243±0.00 0.100±0.04 0.108±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005886 IDA plasma membrane
GO:0005923 IDA tight junction
GO:0016021 IEA integral component of membrane
GO:0016323 IDA basolateral plasma membrane
GO:0016328 IDA lateral plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360325 CLDN7-001 protein_coding Homo_sapiens 0 344
ENST00000397317 CLDN7-003 protein_coding Homo_sapiens 0 344
ENST00000416158 RP11-169L17.3-001 processed_pseudogene Homo_sapiens 0 213
ENST00000538261 CLDN7-201 protein_coding Homo_sapiens 0 344
ENST00000571932 CLDN7-004 protein_coding Homo_sapiens 0 344
ENST00000575313 CLDN7-006 protein_coding Homo_sapiens 0 342
ENST00000577138 RP1-4G17.5-001 nonsense_mediated_decay Homo_sapiens 0 316

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