C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: claudin 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018569 Cldn7 10090 + 11:69964779-69967885 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018713 Cldn7-001 69965396-69967885 protein_coding
  ENSMUST00000060651 Cldn7-004 69964824-69966969 protein_coding
  ENSMUST00000108596 Cldn7-003 69964835-69967882 protein_coding
  ENSMUST00000108597 Cldn7-002 69964779-69967810 protein_coding
  ENSMUST00000151515 Cldn7-005 69966918-69967652 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018713ENSMUST00000060651ENSMUST00000108596ENSMUST00000108597ENSMUST00000151515
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018713 15.559±0.44 0.136±0.01 19.921±5.46 0.028±0.01 5.236±1.79 180.351±14.67 0.348±0.21 9.544±1.06 0.688±0.71 20.815±3.11 N/A 8.217±2.75 27.449±16.79 0.837±0.65
ENSMUST00000060651 0.243±0.00 0.100±0.04 N/A N/A N/A N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A
ENSMUST00000108596 0.200±0.03 0.149±0.05 N/A 0.154±0.04 N/A N/A 0.236±0.01 N/A 0.446±0.28 N/A 0.137±0.00 3.256±0.75 N/A 0.818±0.19
ENSMUST00000108597 7.547±7.43 0.216±0.00 9.662±0.79 0.100±0.00 4.462±1.60 237.817±32.05 0.105±0.07 10.108±1.67 0.405±0.34 14.603±1.02 0.090±0.00 10.813±4.88 11.567±5.88 0.298±0.01
ENSMUST00000151515 N/A 0.525±0.00 N/A N/A 9.634±0.00 N/A 1.673±0.08 N/A 1.631±1.14 N/A 0.306±0.00 9.355±2.33 30.879±1.80 1.401±0.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005923 IDA tight junction
GO:0016021 IEA:NAS integral component of membrane
GO:0016323 IDA basolateral plasma membrane
GO:0016328 IDA lateral plasma membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 ISS identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014047 cldn7b claudin 7b protein_coding Danio_rerio
ENSDARG00000036376 cldn7a claudin 7a protein_coding Danio_rerio
ENSG00000181885 CLDN7 claudin 7 protein_coding Homo_sapiens

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