C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 120, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060805 Fam120a-201 ENSMUSG00000038014 10090 - 13:48879219-48968017 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060805
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060805 32.946±8.66 47.672±3.26 37.701±2.56 19.267±5.52 26.700±7.29 69.293±5.89 19.366±1.55 32.521±1.66 26.842±5.34 26.860±6.07 21.698±0.72 54.193±9.89 54.898±25.35 4.038±1.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WO CIL_0008WO_0002 VISTA 13:48416450-49018010
CIL_0008QG CIL_0008QG_0002 VISTA 13:48479624-49081302
CIL_0000W5 CIL_0000W5_0002 CGP 13:48801750-48968017

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000277165 FAM120A-004 protein_coding Homo_sapiens 0 7014
ENST00000375389 FAM120A-005 protein_coding Homo_sapiens 0 2470
ENST00000375412 FAM120AOS-005 protein_coding Homo_sapiens 0 392
ENST00000417304 RP11-136C24.1-001 unprocessed_pseudogene Homo_sapiens 0 318
ENST00000427765 FAM120A-003 protein_coding Homo_sapiens 0 1269
ENST00000446420 FAM120A-002 protein_coding Homo_sapiens 0 1986
ENST00000475933 FAM120A-001 processed_transcript Homo_sapiens 0 370

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