C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, shaker-related subfamily, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060972 Kcna5-201 ENSMUSG00000045534 10090 - 6:126532553-126698192 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060972
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060972 2.638±2.03 1.591±0.85 0.216±0.13 0.458±0.18 1.964±0.91 0.733±0.11 2.605±0.88 0.672±0.22 0.038±0.02 0.682±0.08 1.893±0.75 2.213±0.81 0.033±0.03 0.068±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BY CIL_0006BY_0002 CGP 6:126532553-126698192

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0005102 IEA receptor binding
GO:0005249 IDA voltage-gated potassium channel activity
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0005887 IC integral component of plasma membrane
GO:0006813 IDA potassium ion transport
GO:0008076 IEA voltage-gated potassium channel complex
GO:0014704 IDA intercalated disc
GO:0015271 IEA outward rectifier potassium channel activity
GO:0016020 IDA membrane
GO:0019229 IMP regulation of vasoconstriction
GO:0019870 IDA potassium channel inhibitor activity
GO:0019901 IEA protein kinase binding
GO:0030018 IEA Z disc
GO:0042391 IGI regulation of membrane potential
GO:0043266 IEA regulation of potassium ion transport
GO:0043267 IDA negative regulation of potassium ion transport
GO:0045121 IEA membrane raft
GO:0046691 IEA intracellular canaliculus
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051259 IEA protein oligomerization
GO:0051260 IEA protein homooligomerization
GO:0051393 IEA alpha-actinin binding
GO:0051481 IEA negative regulation of cytosolic calcium ion concentration
GO:0055075 IEA potassium ion homeostasis
GO:0060081 IEA membrane hyperpolarization
GO:0060372 IEA regulation of atrial cardiac muscle cell membrane repolarization
GO:0071435 IEA potassium ion export
GO:0086014 IEA atrial cardiac muscle cell action potential
GO:0086089 IEA voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization
GO:0086091 IEA regulation of heart rate by cardiac conduction
GO:0097110 IEA scaffold protein binding
GO:1900087 IEA positive regulation of G1/S transition of mitotic cell cycle
GO:2000288 IEA positive regulation of myoblast proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252321 KCNA5-001 protein_coding Homo_sapiens 0 1938
ENST00000280684 KCNA6-001 protein_coding Homo_sapiens 0 617
ENST00000433855 GALNT8-201 protein_coding Homo_sapiens 0 617

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