C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein O, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061241 Apoo-ps-201 ENSMUSG00000049233 10090 - 13:107413865-107414767 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061241
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061241 0.729±0.22 0.847±0.42 0.546±0.09 0.516±0.33 0.771±0.39 0.315±0.11 2.268±0.38 1.980±0.81 0.742±0.30 0.565±0.36 0.820±0.26 1.046±1.10 0.161±0.16 0.311±0.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379226 APOO-002 protein_coding Homo_sapiens 0 920
ENST00000439528 APOO-001 protein_coding Homo_sapiens 0 614
ENST00000476598 APOO-004 processed_transcript Homo_sapiens 5e-20 100
ENST00000490078 APOO-003 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000513530 APOOP4-001 processed_pseudogene Homo_sapiens 0 544
ENST00000564761 APOOP5-001 transcribed_processed_pseudogene Homo_sapiens 0 381

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