C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein O
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379226 APOO-002 ENSG00000184831 9606 - X:23833353-23907934 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379226
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379226 0.788±0.00 5.615±1.19 1.749±0.00 2.125±1.72 8.164±5.94 6.632±5.90 1.029±0.49 2.363±1.85 2.628±0.00 6.249±1.75 1.793±0.36 11.504±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WD CIL_0002WD_0002 CGP X:23783158-23907934

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 ISS extracellular space
GO:0005739 IDA mitochondrion
GO:0006869 IEA lipid transport
GO:0016021 IEA integral component of membrane
GO:0034361 IEA very-low-density lipoprotein particle
GO:0034362 IEA low-density lipoprotein particle
GO:0034364 IEA high-density lipoprotein particle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061241 Apoo-ps-201 protein_coding Mus_musculus 0 920
ENSMUST00000113898 Apoo-004 protein_coding Mus_musculus 0 863
ENSMUST00000113895 Apoo-003 protein_coding Mus_musculus 0 863
ENSMUST00000113897 Apoo-002 protein_coding Mus_musculus 0 861
ENSMUST00000113896 Apoo-001 protein_coding Mus_musculus 0 861

Loading